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Table 4 Summary of Camelina unigene annotations from SOAPdenovo assembly

From: De novo assembly and characterization of Camelina sativatranscriptome by paired-end sequencing

  Unigenes (n) Annotations (n) Functional classification
All assembled unigenes 83,493 - -
Gene annotations against Arabidopsis thaliana protein of NR 45,307 45,307 -
Gene annotations against Arabidopsis lyrata protein of NR 16,969 16,969 -
Gene annotation against Brassica protein of NR 722 722 -
Unique gene annotations against plant NR 67,497 67,497 -
Gene annotation against Swiss-Prot 40,804 40,804 -
Gene annotation against COG 14,190 14,190 25 categories
Gene annotation against KEGG 27,042 27,042 119 pathways
GO annotations for biological process 23,524 49,164 27 sub-categories
GO annotations for cellular component 25,885 37,439 9 sub-categories
GO annotations for molecular function 26,825 30,888 10 sub-categories
All annotated unigenes 67,791 - -
Unigenes matching all four databases 11,685 - -