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Figure 1 | BMC Genomics

Figure 1

From: Population-genomic variation within RNA viruses of the Western honey bee, Apis mellifera, inferred from deep sequencing

Figure 1

Read depth along the length of each viral genome. A. Read depth for DWV. B. Read depth for IAPV. Coding regions are represented at the top of each panel in this and all subsequent figures depicting sliding-window analyses. The maximum coverage is constrained by default limits used in the analysis pipeline. The sharp minima within IAPV were generally found in multiple samples and were virtually unchanged when mapping criteria were relaxed from 4% to 8% divergence, suggesting these gaps are caused by an unknown bias during the generation of sequencing libraries rather than sequence divergence from the reference.

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