Table 1 Validation summary of deletions, inversions and translocations for each sample
From: Gene rearrangements in hormone receptor negative breast cancers revealed by mate pair sequencing
Tumor sample | Deletion | Inversion | Translocation | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Attempted | Non-validated | Constitutional | Somatic | Attempted | Non-validated | Constitutional | Somatic | Attempted | Non-validated | Constitutional | Somatic | |
113 T | 8 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 |
114 T | 5 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 5 | 2 | 3 | 0 |
116 T | 1 | 0 | 1 | 0 | 4 | 2 | 0 | 2 | 1 | 0 | 0 | 1 |
117 T | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 |
118 T | 3 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 12 | 5 | 1 | 6 |
119 T | 1 | 0 | 0 | 1 | 3 | 3 | 0 | 0 | 3 | 0 | 0 | 3 |
120 T | 3 | 0 | 3 | 0 | 3 | 2 | 0 | 1 | 3 | 0 | 0 | 3 |
147 T | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
148 T | 4 | 0 | 4 | 0 | 5 | 5 | 0 | 0 | 8 | 3 | 3 | 2 |
149 T | 16 | 4 | 8 | 4 | 1 | 0 | 0 | 1 | 9 | 4 | 1 | 4 |
150 T | 5 | 1 | 4 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
151 T | 4 | 0 | 4 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 |
152 T | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
153 T | 19 | 9 | 9 | 1 | 6 | 3 | 3 | 0 | 12 | 3 | 3 | 6 |
154 T | 7 | 1 | 5 | 1 | 1 | 0 | 0 | 1 | 4 | 1 | 2 | 1 |