A combined strategy involving Sanger and 454 pyrosequencing increases genomic resources to aid in the management of reproduction, disease control and genetic selection in the turbot (Scophthalmus maximus)

Table 11 Representative sample of miRNAs found in the Turbot 3 database. miRNAs were identified by Blasting Turbot 3 database sequences against the miRBase

Contig number	Read number	Turbot 3 database annotation	miRBase accession name	miRBase annotation
6,514	54	Early growth response 1	MI0020478	Cricetulus griseus miR-29a stem-loop
32,392	3	LSU rRNA	MI0022328	Bos taurus miR-6529 stem-loop
1,984r	97	Serine/threonine-protein phosphatase 2A	MI0014190	Homo sapiens miR-3160-2 stem-loop
34,898r	2	Similar to dynamin 3	MI0000247	Mus musculus miR-204 stem-loop
49,897	2	Similar to Elongation factor 1-gamma	MI0015615	Ciona intestinalis miR-4064 stem-loop
40,442	3	Similar to ORFa	MI0019438	Oryzias latipes miR-133-2 stem-loop
40,442r	3	Similarity to transposases	MI0001124	Oryza sativa miR169i stem-loop
10,002r	1	Spindle and kinetochore-associated protein 2-like	MI0018844	Anolis carolinensis miR-301a stem-loop
8,914r	22	Unknown	MI0019711	Glycine max miR5769 stem-loop
10,002	1	Unnamed protein product	MI006276	Homo sapiens miR-1183 stem-loop

ISSN: 1471-2164