Skip to main content

Table 2 Summary statistics of ( S . maximus ) 454-pyrosequencing

From: A combined strategy involving Sanger and 454 pyrosequencing increases genomic resources to aid in the management of reproduction, disease control and genetic selection in the turbot (Scophthalmus maximus)

Total reads (raw wells)

2,762,845

High quality reads (filtered)

1,191,866

Total megabases (Mb)

341.2

Average read length (bp)

286

N50 read length (bp)

383

Number of contigs

65,472

Number of contigs > 500 bp

32,612

Number of singletons

172,108

Total consensus length (Mb)

41

Average contig coverage

4.6

Maximum coverage

578.7

Mean contig length (bp)

625.9

Median contig length (bp)

499

Mode contig length (bp)

365

N25 contig length (bp)

1,217

N50 contig length (bp)

748

N75 contig length (bp)

482