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Figure 3 | BMC Genomics

Figure 3

From: RNAseq versus genome-predicted transcriptomes: a large population of novel transcripts identified in an Illumina-454 Hydratranscriptome

Figure 3

Assembly procedures of the de - novo ( dn ) and genome-assisted (ga) Hydra transcriptomes. A, B) Schemes showing the de-novo (dn) assembly process of Hydra RNAseq reads (A), and the genome-assisted (ga) and “best of” (bo) assembly processes of Hydra transcriptomes (B). Numbers of sequences are indicated at each step. For steps 2a and 2b, artificial Phred quality values were produced for the dataset called “Contigs” and the sequences were duplicated in order to further correct frameshifts due to 454 sequencing (see Methods section for details).

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BMC Genomics

ISSN: 1471-2164

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