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Table 1 miRNA differentially expressed between species

From: RNA sequencing reveals small RNAs differentially expressed between incipient Japanese threespine sticklebacks

Transcript ID

LG

Start position

Median reads per million (RPM) ± S.D.

Zebrafish homolog

   

Pacific Ocean males

Pacific Ocean females

Japan Sea males

Japan Sea females

 

ENSGACT00000029029

I

7684495

2852.3 (227.8)

4343.0 (1716.7)

10218.3 (1270.0)

4026.2 (860.8)

mir22a-1

ENSGACT00000028961

III

7312510

563.3 (78.4)

1250.9 (684.9)

3683.1 (408.8)

1115.0 (176.9)

mir7a-3

ENSGACT00000028970

VI

4231011

2465.3 (127.5)

2270.1 (62.9)

1858.6 (244.0)

1966.8 (141.3)

mir30c

ENSGACT00000029035

XI

1952924

9700.4 (165.6)

11004.3 (1503.8)

14871.2 (475.2)

12259.0 (332.2)

mir152

ENSGACT00000028984

XIII

7256736

609.2 (80.5)

1294.3 (679.4)

3601.1 (393.0)

1134.8 (168.2)

mir7b

ENSGACT00000029072

XIX

2936579

547.6 (75.4)

1228.1 (681.4)

3503.5 (381.2)

1073.8 (169.6)

mir7a-1

ENSGACT00000029039

XX

15698389

568.3 (73.6)

1245.5 (680.7)

3560.3 (396.7)

1099.6 (167.8)

mir7a-2

  1. LG: linkage group.