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Table 1 cDNA sequences obtained from JF (fruited-leaves in July) and their homologous GenBank records

From: Isolation and expression analysis of cDNAs that are associated with alternate bearing in Olea europaeaL. cv. Ayvalık

cDNA

GenBankAccn No**

Size (nt)

GenBank record(s) with informing similarity

E - Value

Primer pairs used in qRT-PCR (All sequences are presented from 5’ to 3’. F: Forward, R: Reverse)

JF146 JF151 JF187

GW574236

180018201800

Nicotiana tabacum cytochrome P450 monooxygenase (CYP72A56) mRNA (gi85068677)

3e-33 8e-34 5e-36

F: TTCTCGTTTGAGATTTCACCTACTTAT

     

R: AGAGAGAATGCATAACAACATACGATA

JF124* JF150*

GW574235

1500

Capsicum annuum menthone:neomenthol reductase 1 (MNR1) mRNA (gi123691540)

2e-81

F: GGAGTAAGTGTAGAGGGAGATGTCTTA

     

R: ACAACCTTAAGAGTGGAATAAATGCTT

JF111* JF148*

GW574234

1000

Glycine max transcription factor (bZIP124) mRNA (gi113367217)

3e-52

F: ATCTCCTGGTGCATTTAATTATTGAT

     

R: ATCTCCTGGTGCATTTAATTATTGAT

JF154* JF160*

GW574237

3000

Spinacia oleracea ClpC protease mRNA, chloroplast gene encoding chloroplast protein (gbAF043539)

0.0

F: TGTGTTAGAACTCTCACTAGAGGAAGC R: CACCATCTAATAACCTGTGTACGAAAT

JF45

GW574239

3000

O.europaea putative cytochrome P450 mRNA (gi154257296)

5e-20

F: GAGTACAAGGGACAACATTTTGAGTT R: AGTGGATTCTTCTTCCTCAAAGTTAAT

JF46*

GW574240

550

Arnebia euchroma chloroplast protein 12 (CP12) mRNA (gi151564657)

2e-60

F: GTAGGATGTACGTCCACCCAGT

     

R: GTTGTCCTTGCAGTAATCTTCCA

JF126*

GW574241

700

Arabidopsis thaliana integral membrane HRF1 family protein (At3g59500) (gi145339670)

1e-80

F: TGCAGTCAATTTTATTATTTTGTTTGA

     

R: TTTTCCAAATATATTAATGCCAGAACT

JF153*

GW574242

1500

Arabidopsis thaliana emryo defective binding / small GTPase regulator (EMB2754) mRNA (gi78498847)

2e-28

F: TTTTATTGTCTGCATTTCTTCAGTTC

     

R: ATAAACAGAATTGTCCACCACTACAA

JF178

GW574238

3200

Raphanus sativus chloroplast mRNA for ATPase beta subunit (atpB gene) (gi8052351),

Olea europaea ATP synthase epsilon subunit (embCAD23950)

0.0 1e-31

F: AACTTTCTCAAGATTCTTATTCATCCA

     

R: ATAGCACGGAGATCAGTTAATTCAATA

  1. * cDNAs that are new for olive.
  2. ** Obtained from GenBank for the sequences generated through this study.