cDNA | GenBan Accn No** | Size (nt) | GenBank record(s) with informing similarity | E - Value | Primer pairs used in qRT-PCR (All sequences are presented from 5’ to 3’. F: Forward, R: Reverse) |
---|---|---|---|---|---|
NNF14* NNF36* NNF85* | GW574267 | 1430 1360 1410 | Arabidopsis thaliana zinc finger family protein (At2g31770), IBR domain -containing protein (gi91806300) | 0.0 | F: CAGGAATCAAAAGAAAATATTCTGAAC |
R: TCGACTCATAGACAAACTATGTACAGG | |||||
NNF22* | GW574269 | 1100 | Vitis vinifera hypothetical protein mRNA (gi225450142) | 2e-22 | F: CAAATCTCTTCATCTTCTTCAATTCTG |
R: CAGTATAAAAACTTGATTCCCTCCATA | |||||
NNF23* | GW574270 | 1000 | Lycopersicon esculentum temperature - induced lipocalin mRNA (gi77744858) | 0.0 | F: ATATAAGTCTGATCCCAATAGTGACGA |
R: TTCTGTACAAGCATGTAGTGTATCTCC | |||||
NNF24* | GW574271 | 1200 | Nicotiana tabacum eIF4E (initiaition factor) mRNA (gi51599168) | 1e-63 | F: GAATGTCAGATTAAGGCAGGATAAA |
R: AGCTTCTTAGCATCCTCATGAAATA | |||||
NNF29* | GW574272 | 1670 | Arabidopsis thaliana transducin family protein (At2g26490) mRNA (gi42569344) | 1e-74 | F: GGTTGTGTATAGTGGGAGTCTTGATA |
R: ACTTTGATTTGATCAATACTTTGCTG | |||||
NNF31 | GW574273 | 800 | Plantago major cold stress-induced protein (src1 gene) mRNA (gi53748474) | 7e-27 | F: AAAAAGAAGAAAGACAAGAAAAAGCAT |
R: ATACACAATCAAAGAGTAGCCAACAAC | |||||
Retama raetam drought-induced protein (DIP) mRNA (gi16198345) | 1e-24 | ||||
NNF32 | GW574274 | 600 | Multiple tRNA genes and PSII binding proteins (see Accn gi170785617) | 0.0 | F: CTTGAAATCCAATTCTAAAAGATCAAA |
R: ATAATAGAGGAATGGGGGTAGAGTAGA | |||||
NNF59* | GW574275 | 800 | Arabidopsis thaliana PSRP4 (Plastid specific-ribosomal protein 4) mRNA (gi145360741) | 3e-39 | F: ATTCTCTCACATCAATCTCATCTCC |
R: GTCCTCTTCCCTTATTCTTGTCCT | |||||
NNF91* | GW574268 | 660 | Arabidopsis thaliana pre-mRNA splicing factor (At4g14342) mRNA (gi145361320) | 4e-56 | F: TTCTATCGGGTGTATAATTTGATCTTT |
R: TTATTAACCAAGTGGGTACAGATTCTT |