Table 3 Scaffold assembly summary statistics
k | Arm | MP used (%) | No. scaffolds | Contigs in scaffolds | Mean length | Sum scaffolds (Mbp) | Assembly N50* (Kb) | ||
|---|---|---|---|---|---|---|---|---|---|
(min-max) | |||||||||
Mean | Max | % | (Kb) | ||||||
3 | 7BS | 0.96 | 20,654 | 4.51 | 38 | 52 | 11.2 (1.7-143.1) | 168 | 14.49 |
7BL | 1.56 | 31,582 | 4.33 | 43 | 42 | 9.6 (2.0-117.6) | 192 | 11.15 | |
5 | 7BS | 1.06 | 17,481 | 3.81 | 27 | 37 | 10.7 (1.7-129.4) | 148 | 11.03 |
7BL | 1.41 | 23,365 | 3.91 | 32 | 28 | 9.5 (2.2-122.1) | 166 | 8.31 | |
7 | 7BS | 1.14 | 15,230 | 3.4 | 20 | 29 | 10.5 (1.72-109.6) | 133 | 9 |
7BL | 1.48 | 19,610 | 3.56 | 25 | 21 | 9.3 (2.3-81.9) | 148 | 6.33 | |
10 | 7BS | 1.24 | 12,750 | 3.04 | 15 | 22 | 10.5 (1.8-108.9) | 115 | 7.04 |
7BL | 1.58 | 15,896 | 3.22 | 20 | 16 | 9.3 (2.3-77.7) | 128 | 4.49 | |
15 | 7BS | 1.35 | 9,733 | 2,73 | 12 | 15 | 10.7 (2.0-102.4) | 92 | 5.2 |
7BL | 1.7 | 12,052 | 2.89 | 17 | 11 | 9.4 (2.54-67.4) | 103 | 2.84 | |
20 | 7BS | 1.42 | 7,618 | 2,55 | 10 | 11 | 10.9 (2.1-73.3) | 76 | 4.2 |
7BL | 1.79 | 9,458 | 2.68 | 14 | 8 | 9.6 (2.8-69.2) | 84 | 1.97 | |