|  | Counts of |  |  |  |  | Found |
---|---|---|---|---|---|---|---|
miRNAs | Sequences(5’-3’) | miRNAs | miRNA Locations | Arm | LP | MEF | by |
 |  | (miRNAs*) |  |  | (nt) | (kcal/mol) | others |
Ptc-miRn1 | CUGUUAUGAAUUGAUGGAGUG | 71(10) | scaffold_14:13399032:13399142:- | 3’ | 111 | −56.3 |  |
Ptc-miRn2 | UGGUAAUGCAAGUGUUGCUAA | 22(15) | scaffold_11:1025164:1025342:+ | 3’ | 179 | −67.2 |  |
Ptc-miRn3 | UAGAUUGUUUUUAUGCUUUGA | 19(2) | scaffold_16:10809578:10809788:+ | 5’ | 211 | −106.5 | D |
Ptc-miRn4 | CUCUUCAAAUAAAUCGUGGGA | 380(12) | scaffold_4:10873191:10873312:- | 3’ | 122 | −66.8 |  |
Ptc-miRn5 | AAUGUUGUUAUUAACACUGUA | 127(27) | scaffold_4:20884831:20884933:+ | 3’ | 103 | −48.2 |  |
Ptc-miRn6a | UUAUGCAUUUUUGUCCCUCGC | 171(1) | scaffold_4:2221707:2221834:+ | 3’ | 128 | −64.5 |  |
Ptc-miRn6b | UUAUGCAUUUUUGUCCCUCGC | 171(52) | scaffold_5:24265933:24266061:+ | 3’ | 129 | −63.2 | F |
Ptc-miRn6c | UUAUGCAUUUUUGUCCCUCGC | 171(49) | scaffold_5:24270121:24270264:+ | 3’ | 144 | −67.7 |  |
Ptc-miRn6d | UUAUGCAUUUUUGUCCCUCGC | 171(1) | scaffold_5:24280115:24280237:+ | 3’ | 123 | −51.6 | F |
Ptc-miRn7a | UCUUAUGCGUUUUUGUCUCU | 238(3) | scaffold_5:24266243:24266355:+ | 3’ | 113 | −60.7 | D |
Ptc-miRn7b | UCUUAUGCGUUUUUGUCUCU | 238(26) | scaffold_5:24270440:24270552:+ | 3’ | 113 | −61.6 | CD |
Ptc-miRn8 | UUUGGUUAUUGUCUCGAGACA | 1664(23) | scaffold_15:1581044:1581277:- | 5’ | 234 | −95.6 |  |
Ptc-miRn9 | UUUCUUAUCGAUCACUAGACG | 41(1) | scaffold_1112:3373:3393:+ | 3’ | 116 | −54.4 |  |
Ptc-miRn10 | UCUCUUCUGUUCCUGAACGGU | 16(7) | scaffold_1:15618173:15618365:+ | 3’ | 193 | −63.4 |  |
Ptc-miRn11 | UUGCUGAAACGAUUGAACUAU | 70(2) | scaffold_9:10835006:10835091:+ | 3’ | 86 | −48.6 | E |
Ptc-miRn12 | UCUUGAGAACAUGAUGAAUCG | 11(1) | scaffold_11:4410758:4410914:+ | 5’ | 157 | −57.7 |  |
Ptc-miRn13 | UGAUGAUUAAUUGACUGCAAA | 754(51) | scaffold_1:34025510:34025606:+ | 5’ | 97 | −60.1 | E |
Ptc-miRn14 | AUCAUAUAGGUUGAUCCUCGU | 18(1) | scaffold_6:6189111:6189190:- | 5’ | 80 | −58.6 |  |
Ptc-miRn15 | UCUGUCGCUGGAAAGAUGGUAC | 57000(57) | scaffold_17:10902829:10902928:+ | 5’ | 100 | −66.7 | AE |
Ptc-miRn16 | AGAUGGGCAUCGGCAUUGUGA | 116(7) | scaffold_13:797593:797704:- | 3’ | 112 | −48.9 |  |
Ptc-miRn17 | CGCUCGCCAGCGUUGCACCACC | 618(247) | scaffold_1:10455697:10455799:- | 5’ | 103 | −47.3 | E |
Ptc-miRn18 | UUUGAAAUUGAACAAAUGGUA | 10(1) | scaffold_5:17113917:17114027:+ | 5’ | 111 | −64.6 |  |
Ptc-miRn19 | UUGCAUGCAUGAACUUGAAAU | 178(4) | scaffold_4:20393549:20393757:+ | 3’ | 209 | −81.1 | B |
Ptc-miRn20 | UUGAGAAAAGUCAAUCGGACC | 11(1) | scaffold_13:7256997:7257111:- | 5’ | 115 | −48.5 |  |
Ptc-miRn21 | UGUUCAGAUCAGUAGAUAGCA | 1310(29) | scaffold_8:207741:207864:- | 5’ | 124 | −46.6 | BE |
Ptc-miRn22 | UAGAGCAGAUUGUAAGGGAAG | 528793(209) | scaffold_1:5198865:5198974:- | 3’ | 110 | −49.3 | CDE |
Ptc-miRn23 | UUGAAGAAAGGUAGACAGAUAG | 207(1) | scaffold_3:14589106:14589377:- | 3’ | 272 | −74.3 | D |
Ptc-miRn24a | CGAACGUUGACCGAAUGUGAA | 15(3) | scaffold_10:11417598:11417684:- | 5’ | 87 | −31.9 |  |
Ptc-miRn24b | CGAACGUUGACCGAAUGUGAA | 15(3) | scaffold_1646:4003:4023:+ | 5’ | 88 | −35.4 |  |
Ptc-miRn25 | UUGUACACAGAAUAGGUGAAAU | 1624(7) | scaffold_5:1237647:1237753:+ | 3’ | 107 | −35.4 | CE |
Ptc-miRn26 | UUACCAAGUUUCAAAUUCUCA | 8(5) | scaffold_16:2500220:2500318:- | 5’ | 99 | −53.1 |  |
Ptc-miRn27 | GCUAGGACCAAGUUUUUUGGA | 367(50) | scaffold_13:9970810:9970906:+ | 5’ | 97 | −58 |  |
Ptc-miRn28 | GAUGACAUGGACACCAAAAUC | 9(6) | scaffold_1:35822741:35822925:- | 5’ | 185 | −64 |  |
Ptc-miRn29 | ACACAGAAACUCCAAGCCCAC | 48(2) | scaffold_15:14059579:14059742:- | 3’ | 164 | −88.4 |  |
Ptc-miRn30 | UGAUCUAGAGAACCGUUGCU | 38(3) | scaffold_15:5977842:5977957:+ | 5’ | 116 | −54.5 |  |
Ptc-miRn31 | UACAUGUAGAGACCACCAAAC | 75(51) | scaffold_10:2022789:2023023:+ | 5’ | 235 | −97.1 |  |
Ptc-miRn32 | UGUCGCAGGAGAGAUGGCGCUA | 216(21) | scaffold_17:10888890:10889033:+ | 5’ | 144 | −67.8 | D |
Ptc-miRn33 | UAGUUCCCAACCUACACCACA | 6(2) | scaffold_12:5445549:5445646:+ | 5’ | 98 | −63.8 |  |
Ptc-miRn34 | UAAUUAGAACUCAUACUAGAC | 44(4) | scaffold_13:3364782:3364868:+ | 5’ | 87 | −38.6 |  |
Ptc-miRn35 | UUGCCGACCCCACCCAUGCCAA | 1127(309) | scaffold_10:12814698:12814812:- | 3’ | 115 | −49 | D |
Ptc-miRn36 | UGGAUGAUCAUGUUGGCAACC | 1614(364) | scaffold_4:6132662:6132818:+ | 3’ | 157 | −60.3 | BE |
Ptc-miRn37 | UGUGAUAAUGGAGGCUAUGGU | 88(1) | scaffold_1:5941972:5942066:+ | 3’ | 95 | −75.8 | E |
Ptc-miRn38 | UAAUAAAAUCUCGACUAUUAU | 249(4) | scaffold_11:535912:536007:- | 5’ | 96 | −44 |  |
Ptc-miRn39 | UGGACUCCUUUGGGGAGAUGG | 216(2) | scaffold_15:12480557:12480647:+ | 3’ | 91 | −41.1 | BE |
Ptc-miRn40 | UCGAAUUUGGGCUUGAGAUUG | 50787(2158) | scaffold_3:9383285:9383395:+ | 3’ | 111 | −45.4 | ABE |
Ptc-miRn41 | GGAAACCUUUUGUGGGGGUUU | 491(9) | scaffold_15:12329506:12329600:- | 3’ | 95 | −44.7 | DE |
Ptc-miRn42 | GGCAUGAGGUGUUUGGCAAGA | 1721(1155) | scaffold_5:11901572:11901665:- | 5’ | 94 | −38.9 | A |
Ptc-miRn43 | GAUGGGAUUUUUCGGGAAGUG | 41(13) | scaffold_10:17756662:17756763:+ | 3’ | 102 | −52.3 |  |
Ptc-miRn44 | GUUUUCCCUGAAUCACUCCCA | 15(7) | scaffold_5:21920822:21920920:- | 5’ | 99 | −55.8 |  |
Ptc-miRn45a | UGGGUGGGAGGUGUGGUAGCU | 8(1) | scaffold_5:9237322:9237483:- | 5’ | 162 | −79.9 |  |
Ptc-miRn45b | UGGGUGGGAGGUGUGGUAGCU | 8(1) | scaffold_724:8193:8213:+ | 5’ | 166 | −78.7 |  |
Ptc-miRn46 | ACAUGUGCUGGGUAGGAGGAA | 21(4) | scaffold_6:9390506:9390758:- | 3’ | 253 | −86.8 |  |
Ptc-miRn47 | AGUGGCAUUGGAGGUAUCCC | 297(18) | scaffold_1:22901250:22901371:- | 3’ | 122 | −34.7 | D |
Ptc-miRn48 | UCUCAAGCCCAAAUUCGAUC | 8(2) | scaffold_3:9383296:9383382:- | 5’ | 87 | −35 | B |
Ptc-miRn49 | CAAGGAGUAAUUAGUGACAUC | 974(1) | scaffold_9:7737213:7737443:+ | 5’ | 231 | −63.3 |  |
Ptc-miRn50 | UGAUAUGUGGCAUUCAAUCGA | 2880(8) | scaffold_3:14915775:14915873:+ | 3’ | 99 | −77.1 | E |
Ptc-miRn51a | GCCGAGCUCGGGGAUUGCG | 84645(465) | scaffold_17:2344664:2344909:+ | 3’ | 246 | −141.5 |  |
Ptc-miRn51b | GCCGAGCUCGGGGAUUGCG | 84645(465) | scaffold_17:2357226:2357471:+ | 3’ | 246 | −143 |  |
Ptc-miRn51c | GCCGAGCUCGGGGAUUGCG | 84645(465) | scaffold_17:2307047:2307292:+ | 3’ | 246 | −137.4 |  |
Ptc-miRn51d | GCCGAGCUCGGGGAUUGCG | 84645(465) | scaffold_17:2279166:2279411:+ | 3’ | 246 | −137.6 |  |
Ptc-miRn51e | GCCGAGCUCGGGGAUUGCG | 84645(465) | scaffold_17:2268545:2268790:+ | 3’ | 246 | −139.3 |  |
Ptc-miRn52 | GGGGGUUGCUGUCAAGCAUAA | 61(19) | scaffold_18:2804678:2804833:+ | 3’ | 156 | −74.6 | B |
Ptc-miRn53 | UAAAUCAAGCCCGGUACUUUU | 10(2) | scaffold_11:15209261:15209374:- | 5’ | 114 | −42.6 |  |
Ptc-miRn54a | UUCAUUCCUCUUCCUAAAAUGG | 1827(506) | scaffold_15:8556706:8556831:+ | 5’ | 126 | −61 | ABCE |
Ptc-miRn54b | UUCAUUCCUCUUCCUAAAAUGG | 1827(500) | scaffold_12:7706162:7706287:- | 5’ | 126 | −50.9 | ABCDE |