Table 2 The overview annotation of contigs generated from control, aphid 2Â h, aphid 24Â h, whitefly 2Â h, whitefly 24Â h and super contigs with TAIR blast and cotton EST blast
Conditions | Control | Aphid (2Â h) | Aphid (24Â h) | Whitefly (2Â h) | Whitefly (24Â h) | Super contigs |
|---|---|---|---|---|---|---|
Total Contigs | 20249 | 19974 | 19307 | 23075 | 18330 | 14810 |
Number of singletons | 73724 | 70696 | 70310 | 67162 | 72412 | 18315 |
Average contig length | 546.99 | 516.62 | 511.26 | 559.03 | 512.68 | 684.43 |
TAIR blast | Â | Â | Â | Â | Â | Â |
Matched contigs (no.) | 14548 | 13564 | 13062 | 16779 | 12780 | 7932 |
Unmatched contigs(no.) | 5701 | 6410 | 6245 | 6296 | 5550 | 6878 |
Cotton EST blast | Â | Â | Â | Â | Â | Â |
Matched contigs(no.) | 9402 | 9334 | 9177 | 10281 | 8748 | 14230 |
Unmatched contigs(no.) | 10847 | 10640 | 10130 | 12794 | 9582 | 580 |