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Table 1 Summary of the total 454 sequencing and the assembly results for P. ginseng four tissues

From: Transcriptome analysis reveals ginsenosides biosynthetic genes, microRNAs and simple sequence repeats in Panax ginsengC. A. Meyer

 

No. of sequences

No. of bases

High-quality reads

2,423,076

980,165,285

Average high-quality read length (bp)

404.5

 

Reads used in assembly

2,151,832

863,992,539

Number of contigs ≥100 bp

86,609

40,589,347

Average length of contigs (bp)

468.7

 

Range of contig lengths (bp)

100-7,858

 

Number of singletons ≥100 bp

91,536

35,032,649

Average length of singletons (bp)

382.9

 

Range of singleton lengths (bp)

100-691

 

Number of unigenes (contigs and singletons)

178,145

 

Total coverage (bp)

75,621,996