≥10x coverage (%) | ≥20x coverage (%) | Genotype coverage (%) | |||||||
---|---|---|---|---|---|---|---|---|---|
demoX | chrX_nonPAR | chrX_nonPAR | demoX | chrX_nonPAR | chrX_nonPAR | demoX | chrX_nonPAR | chrX_nonPAR | |
CCDS | UCSC | CCDS | UCSC | CCDS | UCSC | ||||
SHS | 87.8 | 87.9 | 75.4 | 83.2 | 84.4 | 71.3 | 86.7 | 86.8 | 74.3 |
SHS-PE | 92.0 | 91.6 | 81.3 | 90.2 | 89.8 | 78.9 | 91.6 | 91.2 | 80.8 |
SHS-PE Low | 70.7 | 70.4 | 61.8 | 29.0 | 29.2 | 27.8 | 66.4 | 66.1 | 58.5 |
FS | 78.2 | 86.5 | 77.4 | 38.9 | 48.7 | 37.5 | 69.9 | 78.8 | 68.9 |