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Figure 5 | BMC Genomics

Figure 5

From: A zebrafish high throughput screening system used for Staphylococcus epidermidisinfection marker discovery

Figure 5

Gene expression during S. epidermidis infection. Micro-array data are shown of S. epidermidis-injected versus non-injected samples at 6 HPI, 1, 2, 3, 4 and 5 DPI time points. The yellow boxes represent up-regulation and the blue boxes down-regulation with a P-value smaller than 10-8 and fold changes larger than 2 or smaller than −2. The top right bar shows the RNA deep sequencing data, where the green boxes represent significant up regulation. The white boxes could not be identified by RNA deep sequencing. Grey boxes mean that data did not meet the significant criteria. Genes were manually annotated and assigned to functional groups based on GO annotations of the zebrafish genes and their human homologues and on searching on PubMed abstracts. The D. rerio Uni-Gene Build # 124 or ENSEMBL Zv9 codes were used as shown with the raw data table in Additional file 4).

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