Table 3 The distribution and density of markers across 19 rapeseed chromosomes of the consensus map
Chromosome (Linkage group) | Number of marker in consensus map | Map length (cM) | Mean distance between markers (cM) | No of marker-gaps >10 cM | *Redundancy in DArT marker (%) | Redundancy in Non-DArT markers (%) |
|---|---|---|---|---|---|---|
A1 | 110 | 123.6 | 1.12 | 2 | 19/71 (26.8%) | 1/39 (2.6%) |
A2 | 70 | 90.5 | 1.29 | 1 | 13/48 (27.1%) | 0/22 (0%) |
A3 | 156 | 144.9 | 0.93 | - | 22/85 (25.9%) | 1/71 (1.4%) |
A4 | 97 | 102.3 | 1.06 | - | 12/81 (14.8%) | 0/16 (0%) |
A5 | 92 | 82.0 | 0.89 | - | 14/75 (18.7%) | 0/17 (0%) |
A6 | 118 | 107.7 | 0.91 | - | 21/91 (23.1%) | 1/27 (3.7%) |
A7 | 81 | 115.3 | 1.42 | 1 | 7/34 (20.6%) | 1/47 (2.1%) |
A8 | 35 | 66.9 | 1.91 | - | 1/17 (5.9%) | 0/18 (0%) |
A9 | 145 | 128.3 | 0.89 | - | 23/81 (28.4%) | 0/64 (0%) |
A10 | 82 | 101.1 | 1.23 | 1 | 11/54 (20.4%) | 0/28 (0%) |
A genome (total) | 986 | 1062.5 | 1.08 | 5 | 143/637 (22.4%) | 4/349 (1.1%) |
C1 | 42 | 63.8 | 1.52 | - | 9/22 (40.9%) | 0/20 (0%) |
C2 | 51 | 110.2 | 2.16 | 2 | 8/35 (22.9%) | 0/16 (0%) |
C3 | 76 | 153.9 | 2.03 | 1 | 9/30 (30.0%) | 1/46 (2.2%) |
C4 | 45 | 132.9 | 2.95 | 1 | 2/21 (9.52%) | 0/24 (0%) |
C5 | 24 | 93.9 | 3.91 | 1 | 1/7 (14.3%) | 0/17 (0%) |
C6 | 42 | 98.8 | 2.35 | 3 | 0/11 (0%) | 0/31 (0%) |
C7 | 23 | 59.5 | 2.58 | - | 0/8 (0%) | 0/15 (0%) |
C8 | 31 | 103 | 3.32 | 2 | 0/8 (0%) | 0/23 (0%) |
C9 | 39 | 108.6 | 2.79 | 1 | 2/12 (16.7%) | 0/27 (0%) |
C genome (total) | 373 | 924.6 | 2.48 | 11 | 31/154 (20.1%) | 1/219 (0.5%) |
AC genomes (total) | 1359 | 1987.2 | 1.46 | 16 | 174/791 (22.0%) | 5/568 (0.9%) |