Skip to main content

Table 4 C. sinense unigenes that share homology with flowering time genes

From: Transcriptome analysis of Cymbidium sinense and its application to the identification of genes associated with floral development

Category Gene ID Homologous gene Nr-ID
Photoperiod pathway CL636.Contig1_JX GI ADP92454.1
  CL8490.Contig1_JX ADP92454.1
  Unigene61105_JX ELF3 ABL11477.1
  Unigene61030_JX PIF3 NP_001063455.1
  Unigene31120_JX LHY ACF60466.1
  Unigene14045_JX CHS NP_001064831.1
  CL2407.Contig1_JX O23729.1
  Unigene68739_JX CCA1 ABW87009.1
  CL1617.Contig2_JX CO NP_001047975.1
  CL1617.Contig1_JX NP_001057441.1
  CL10349.Contig1_JX NP_001062363.2
  CL10838.Contig1_JX ADL36678.1
Vernalization pathway Unigene49191_JX VRN2 ABD85301.1
  Unigene49192_JX ABD85301.1
  Unigene50102_JX ABD85301.1
Floral integrator pathway Unigene4182_JX FT/HD3a ADI58462.1
  Unigene43540_JX ABX11019.1
  Unigene7817_JX CBY25182.1
  CL743.Contig1_JX ADP89470.1
  CL743.Contig2_JX ADP89470.1
  Unigene35813_JX TFL ACX53295.1
  Unigene36169_JX BAD02372.1
  CL11326.Contig1_JX AP2 ABB90554.1
  CL12341.Contig1_JX NP_001147356.1
  CL1488.Contig1_JX AAZ95247.1
  CL1700.Contig1_JX AAZ66389.1
  CL2122.Contig1_JX XP_002304138.1
  CL260.Contig1_JX XP_002274890.1
  CL260.Contig2_JX XP_002274890.1
  CL260.Contig3_JX XP_002274890.1
  CL260.Contig4_JX XP_002274890.1
  CL3589.Contig1_JX XP_002325111.1
  Unigene32766_JX SOC1 ADP06386.1
  Unigene59851_JX ADJ67241.1
  Unigene32196_JX BAC55080.1
  Unigene10614_JX ADJ67238.1
  Unigene59851_JX CAL ADJ67241.1
  Unigene10812_JX ADI58464.1
Floral meristem identity Unigene32196_JX LFY BAC55080.1
  Unigene630_JX AAY40170.1
  Unigene2289_JX AP1 ADP00515.1
  CL162.Contig1_JX ADJ67240.1
  CL162.Contig2_JX   ADJ67240.1