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Table 4 C. sinense unigenes that share homology with flowering time genes

From: Transcriptome analysis of Cymbidium sinense and its application to the identification of genes associated with floral development

Category

Gene ID

Homologous gene

Nr-ID

Photoperiod pathway

CL636.Contig1_JX

GI

ADP92454.1

 

CL8490.Contig1_JX

ADP92454.1

 

Unigene61105_JX

ELF3

ABL11477.1

 

Unigene61030_JX

PIF3

NP_001063455.1

 

Unigene31120_JX

LHY

ACF60466.1

 

Unigene14045_JX

CHS

NP_001064831.1

 

CL2407.Contig1_JX

O23729.1

 

Unigene68739_JX

CCA1

ABW87009.1

 

CL1617.Contig2_JX

CO

NP_001047975.1

 

CL1617.Contig1_JX

NP_001057441.1

 

CL10349.Contig1_JX

NP_001062363.2

 

CL10838.Contig1_JX

ADL36678.1

Vernalization pathway

Unigene49191_JX

VRN2

ABD85301.1

 

Unigene49192_JX

ABD85301.1

 

Unigene50102_JX

ABD85301.1

Floral integrator pathway

Unigene4182_JX

FT/HD3a

ADI58462.1

 

Unigene43540_JX

ABX11019.1

 

Unigene7817_JX

CBY25182.1

 

CL743.Contig1_JX

ADP89470.1

 

CL743.Contig2_JX

ADP89470.1

 

Unigene35813_JX

TFL

ACX53295.1

 

Unigene36169_JX

BAD02372.1

 

CL11326.Contig1_JX

AP2

ABB90554.1

 

CL12341.Contig1_JX

NP_001147356.1

 

CL1488.Contig1_JX

AAZ95247.1

 

CL1700.Contig1_JX

AAZ66389.1

 

CL2122.Contig1_JX

XP_002304138.1

 

CL260.Contig1_JX

XP_002274890.1

 

CL260.Contig2_JX

XP_002274890.1

 

CL260.Contig3_JX

XP_002274890.1

 

CL260.Contig4_JX

XP_002274890.1

 

CL3589.Contig1_JX

XP_002325111.1

 

Unigene32766_JX

SOC1

ADP06386.1

 

Unigene59851_JX

ADJ67241.1

 

Unigene32196_JX

BAC55080.1

 

Unigene10614_JX

ADJ67238.1

 

Unigene59851_JX

CAL

ADJ67241.1

 

Unigene10812_JX

ADI58464.1

Floral meristem identity

Unigene32196_JX

LFY

BAC55080.1

 

Unigene630_JX

AAY40170.1

 

Unigene2289_JX

AP1

ADP00515.1

 

CL162.Contig1_JX

ADJ67240.1

 

CL162.Contig2_JX

 

ADJ67240.1