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Table 1 Transcript abundance

From: Unscrambling butterfly oogenesis

Ovary/Egg LOG2 fold change Egg/Ovary LOG2 fold change FPKM - value
spherulin-2A signal transducing adapter molecule 1 ribosomal protein LP2
PACG20471 nucleolar GTP-binding protein 2 40S ribosomal protein S6
chorion class A precursor family 5 ubiquitin-conjugating enzyme E2 S ribosomal protein L39
Bmtitin1 SLIT-ROBO Rho GTPase-activating protein cytochrome oxidase subunit 3
Egg protein 80 mo-molybdopterin cofactor sulfurase Bmtitin1
Vitellogenin poly U binding factor 68kD ribosomal protein L32
chorion class A precursor family 3 NADH dehydrogenase subunit 6 40S ribosomal protein S28
chorion class A precursor family 4 PACG6651 ubiquitin
PACG21670 chromatin regulatory protein sir2 Ferritin 2 – light chain homolog
chorion class C precursor family 2 PACG13792 BmBR-C gene for Broad-Complex isoform Z2
putative uncharacterized protein DDB DNA repair protein complementing XP-A cells homolog polyubiquitin
PACG20450 disulfide oxidoreductase ribosomal protein L27
PACG21661 PACG710 60S ribosomal protein L28
PACG24051 similar to phosphinothricin acetyltransferase gene PACG20761
chorion class B precursor family 1 PACG5386 60S ribosomal protein L18
chorion protein-like abhydrolase domain-containing protein 1 translationally controlled tumor protein
endonuclease-reverse transcriptase RAD51C protein ribosomal protein S3A
spec2 PACG18339 60S ribosomal protein L38
PACG19208 PACG19350 ribosomal protein L7A
PACG20509 SLIT-ROBO Rho GTPase-activating protein 1-like heat shock protein cognate 3
  1. Transcript abundance (on the basis of FPKM values) in the Pararge aegeria ovarian/oocyte transcriptome (see also Additional file 2). The first column is a measure of which transcripts were most abundant in the ovaries compared to those present as maternal transcripts in the oocytes. These are genes highly expressed in the ovaries, but with few to no maternal transcripts in the oocyte. The genes listed in column 2 have relatively high FPKM values in the oocytes compared to the ovaries, indicating large concentrations of transcripts (see also Additional file 2). The third column lists the genes most transcribed during P. aegeria oogenesis. Columns list the gene top 20, from high to low.