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Table 2 Sequencing and annotation summary

From: Unscrambling butterfly oogenesis

Location/Feature

Contigs annotated

Manually curated

Av. Contig (bp)

Av. CDS (bp)

Av. 5' UTR (bp)

Av. 3'UTR (bp)

Genomic

16919

1564

625.99

459.89

69.61

75.17

Complete CDS

4530

473

1022.96

667.12

142.07

210.79

Homology

3055

466

1196.75

855.06

124.15

214.53

Novel

1475

7

663.02

277.87

179.18

203.02

Partial CDS

11842

992

485.34

393.59

45.11

26.77

Homology

8054

975

521.96

454.21

51.65

12.67

Novel

3788

17

407.48

264.69

31.20

56.73

Partial mRNA

547

99

383.36

179.24

0.00

0.00

Mitochondrion

387

11

728.64

563.20

83.18

75.32

Complete CDS

177

7

996.59

719.80

115.86

157.94

Partial CDS

201

3

510.06

443.30

58.13

5.95

Partial mRNA

9

1

340.67

161.22

0.00

0.00

Grand Total

17306

1575

628.28

462.20

69.91

75.18

  1. A total of 17306 sequences have been submitted. The sequences are classified below according to their location (i.e. nuclear or mitochondrial genome), completeness and annotation status (i.e. whether orthoogous sequences could be found in other Metazoa or not). Characteristics of the contigs are listed, such as average size of the contig, coding sequence and the 3’ and 5’ UTRs (all in base-pairs, bp).