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Table 2 Sequencing and annotation summary

From: Unscrambling butterfly oogenesis

Location/Feature Contigs annotated Manually curated Av. Contig (bp) Av. CDS (bp) Av. 5' UTR (bp) Av. 3'UTR (bp)
Genomic 16919 1564 625.99 459.89 69.61 75.17
Complete CDS 4530 473 1022.96 667.12 142.07 210.79
Homology 3055 466 1196.75 855.06 124.15 214.53
Novel 1475 7 663.02 277.87 179.18 203.02
Partial CDS 11842 992 485.34 393.59 45.11 26.77
Homology 8054 975 521.96 454.21 51.65 12.67
Novel 3788 17 407.48 264.69 31.20 56.73
Partial mRNA 547 99 383.36 179.24 0.00 0.00
Mitochondrion 387 11 728.64 563.20 83.18 75.32
Complete CDS 177 7 996.59 719.80 115.86 157.94
Partial CDS 201 3 510.06 443.30 58.13 5.95
Partial mRNA 9 1 340.67 161.22 0.00 0.00
Grand Total 17306 1575 628.28 462.20 69.91 75.18
  1. A total of 17306 sequences have been submitted. The sequences are classified below according to their location (i.e. nuclear or mitochondrial genome), completeness and annotation status (i.e. whether orthoogous sequences could be found in other Metazoa or not). Characteristics of the contigs are listed, such as average size of the contig, coding sequence and the 3’ and 5’ UTRs (all in base-pairs, bp).