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Table 1 Identified QTL affecting growth traits in the Asian seabass

From: Whole genome scanning and association mapping identified a significant association between growth and a SNP in the IFABP-a gene of the Asian seabass

Traits

Average (sd)

QTL ID

Significance level

Linkage group

QTL interval

Peak position (cM)

PVE (%)

BW6M

227.6 (±62.0) g

bw6m_a

*

LG2

15.0-20.0

18.0

3.0

  

bw6m_b

***

LG5

0.0

0.0

7.2

  

bw6m_c

*

LG7

6.9-21.9

10.9

3.2

  

bw6m_d

*

LG11

7.0-8.7

7.7

2.9

  

bw6m_e

*

LG13

0.0-2.0

0.0

2.5

  

bw6m_f

*

LG21

0.0-5.0

0.0

3.7

  

bw6m_g

**

LG23

20.9-34.0

20.9

4.3

  

bw6m_h

***

LG24

0.0-5.5

2.0

5.2

BW9M

340.8 (±110.3) g

bw9m_a

***

LG5

0.0

0.0

10.2

  

bw9m_b

*

LG7

6.9-23.6

10.9

1.7

  

bw9m_c

*

LG9

0.0

0.0

6.2

  

bw9m_d

*

LG9

14.8-19.9

17.9

6.0

  

bw9m_e

*

LG18

9.2-30.3

17.2-18.2

6.8

SL6M

206.1 (±20.3) cm

sl6m_a

*

LG3

6.9-19.9

12.9-13.9

4.3

  

sl6m_b

***

LG5

0.0

0.0

7.2

  

sl6m_c

*

LG7

0.0-23.6

15.9

3.8

  

sl6m_d

**

LG11

6.0-8.7

7.7

4.6

  

sl6m_e

*

LG15

24.7-65.0

33.0

3.0

  

sl6m_f

*

LG18

10.2-14.2

11.2-13.2

3.3

  

sl6m_g

**

LG21

0.0-5.0

0.0

4.8

  

sl6m_h

**

LG24

0.0-5.5

3.0

4.0

  

sl6m_i

*

LG24

7.1-8.1

7.1

10.3

SL9M

229.5 (±24.1) cm

sl9m_a

***

LG5

0.0

0.0

2.1

  

sl9m_b

*

LG5

36.1-42.5

42.5

10.5

  

sl9m_c

*

LG6

4.7-34.2

31.1-33.1

6.4

  

sl9m_d

*

LG7

9.9-15.9

12.9-13.9

2.2

  

sl9m_e

***

LG9

8.8-21.9

16.9

5.0

  

sl9m_f

***

LG15

0.0-85.8

50.0-51.0

11.1

  

sl9m_g

*

LG18

2.2-16.2

9.2

3.2

  

sl9m_h

***

LG21

0.0-5.0

1.0

7.6

TL6M

238.9 (±22.2) cm

tl6m_a

***

LG5

0.0

0.0

9.3

  

tl6m_b

*

LG7

6.9-23.6

12.9

3.8

  

tl6m_c

***

LG11

6.0-8.7

7.7

4.8

  

tl6m_d

*

LG13

0.0-5.2

0.0-1.0

2.9

  

tl6m_e

**

LG15

23.7-73.0

33.0-34.0

4.4

  

tl6m_f

*

LG18

0.0

0.0

2.1

  

tl6m_g

***

LG21

0.0-5.0

0.0

5.3

  

tl6m_h

***

LG24

0.0-5.5

3.0-4.0

4.8

  

tl6m_i

*

LG24

7.1-10.1

8.1

12.0

TL9M

277.8 (±28.0) cm

tl9m_a

*

LG2

16.0-21.0

18.0-19.0

5.7

  

tl9m_b

***

LG5

0.0

0.0

5.4

  

tl9m_c

*

LG7

6.0-17.9

8.9-9.9

0.9

  

tl9m_d

**

LG9

9.8-21.9

16.91

1.1

  

tl9m_e

***

LG15

23.7-85.8

50.0-54.0

11.0

  

tl9m_f

***

LG21

0.0-5.0

1.0

11.2

  1. *, Chromosome-wide LOD significance (P < 0.05); **, genome-wide significance (P < 0.05); ***, genome-wide significance (P < 0.01); PVE: the proportion of phenotypic variance explained. ‘BW6M and BW9M’, body weight at six and nine months; ‘TL6M and TL9M’, total length at six and nine months; ‘SL6M and SL9M’, standard length at six and nine months.