Genome wide analysis of the complete GlnR nitrogen-response regulon in Mycobacterium smegmatis

BMC Genomics

Table 2 Five GlnR binding sites identified in M. smegmatis during nitrogen excess

Peak	Coordinates	Peak intensity in N excess	Peak intensity in N limitation	Gene ID	Gene description
1	1832291 - 1832331	6.7	46.5	MSMEG1738	Probable transmembrane protein
2	2508171 - 2508211	5.38	101.46	MSMEG2425*	amtB Ammonium transporter
3	4374771-4374811	6.27	184.71	MSMEG4290	glnA Glutamine synthetase
4	4381891 - 4381931	6.94	49.84	MSMEG4294	glnA Glutamine synthetase, type I
5	5651011 -5651051	5.51	18.6	MSMEG5561	HPP family protein

Fold enrichment of each GlnR binding sites (peaks) observed in nitrogen excess with peak intensity in nitrogen limitation given for comparison. Genes in operons are denoted by *.

ISSN: 1471-2164