Table 2 Genomic features of the species under analysis
From: Short and long-term genome stability analysis of prokaryotic genomes
Organism | Core | Acc. | Sing. | Ref. (id) | Abbrev. | N | Pathogen | Taxonomy |
|---|---|---|---|---|---|---|---|---|
Acinetobacter baumannii | 1994 | 1676 | 1889 | ACICU (58765) | ABAU | 6 | X | Ī³ |
Bacillus anthracis | 4318 | 1620 | 709 | CDC 684 (59303) | BANT | 6 | X | Firmicutes |
Bacillus cereus | 3656 | 2672 | 3855 | B4264 (58757) | BCEREU | 9 | x | Firmicutes |
Bifidobacterium longum | 1193 | 998 | 1458 | NCC2705 (57939) | BLONG | 7 | - | Actino. |
Buchnera aphidicola | 326 | 252 | 40 | Sg (57913) | BAPHI | 6 | - | Ī³ |
Burkholderia cenocepacia | 5288 | 1527 | 2146 | AU 1054 (58371) | BCENO | 4 | X | Ī² |
Burkholderia mallei | 3526 | 1885 | 1963 | NCTC 10229 (58383) | BMALL | 4 | X | Ī² |
Burkholderia pseudomallei | 2942 | 3748 | 2871 | K96243 (57733) | BPMALL | 5 | X+plant | Ī² |
Campylobacter jejuni | 1005 | 752 | 911 | NCTC 11168 (57587) | CJEJU | 7 | X | Īµ |
Chlamydia trachomatis | 851 | 47 | 27 | Bu (61633) | CTRAC | 6 | X | Chlamydia |
Chlamydophila pneumoniae | 1020 | 52 | 147 | J138 (57829) | CPNEU | 4 | X | Chlamydia |
Clostridium botulinum | 1153 | 3636 | 3201 | A Hall (58931) | CBOTU | 11 | X | Firmicutes |
Coxiella burnetii | 1383 | 589 | 703 | RSA 493 (57631) | CBURN | 5 | X | Ī³ |
Escherichia coli | 2322 | 4997 | 7748 | IAI1 (59377) | ECOLI | 30 | x | Ī³ |
Francisella tularensis | 1160 | 512 | 654 | OSU18 (58687) | FTULA | 7 | X | Ī³ |
Haemophilus influenzae | 1130 | 695 | 542 | 86 028NP (58093) | HINF | 6 | X | Ī³ |
Lactococcus lactis | 1566 | 671 | 1480 | KF147 (42831) | LLACT | 4 | - | Firmicutes |
Legionella pneumophila | 2433 | 752 | 849 | Paris (58211) | LPNEU | 5 | X | Ī³ |
Listeria monocytogenes | 2474 | 623 | 557 | EGD e (61583) | LMONO | 6 | X | Firmicutes |
Methanococcus maripaludis | 1487 | 225 | 497 | C6 (58947) | MMARI | 4 | - | Euryarch. |
Mycobacterium tuberculosis | 3627 | 445 | 590 | CDC1551 (57775) | MTUBE | 5 | X | Actino. |
Neisseria meningitidis | 1467 | 506 | 755 | MC58 (57817) | NMENI | 5 | X | Ī² |
Prochlorococcus marinus | 1232 | 1725 | 2027 | CCMP1986 (57761) | PMARIN | 12 | - | Cyano. |
Pseudomonas aeruginosa | 4909 | 842 | 1694 | PA7 (58627) | PAERU | 4 | x(opp.) | Ī³ |
Pseudomonas putida | 3773 | 1279 | 2535 | F1 (58355) | PPUT | 4 | - | Ī³ |
Ralstonia solanacearum | 2442 | 2000 | 2698 | CFBP2957 (50545) | RSOLA | 4 | X plant | Ī± |
Rhodobacter sphaeroides | 2938 | 1177 | 2158 | ATCC 17029 (58449) | RSPHAE | 4 | - | Ī± |
Rhodopseudomonas palustris | 2610 | 2673 | 3516 | TIE 1 (58995) | RPALU | 7 | - | Ī± |
Salmonella enterica | 2645 | 2904 | 3506 | Gallinarum 287 91 (59249) | SENT | 16 | X | Ī³ |
Shewanella baltica | 3520 | 745 | 1891 | OS185 (58743) | SBALT | 4 | - | Ī³ |
Staphylococcus aureus | 1879 | 1166 | 906 | Newman (58839) | SAUR | 15 | X | Firmicutes |
Streptococcus pneumoniae | 1407 | 1091 | 1137 | ATCC 700669 (59287) | SPNEU | 14 | X | Firmicutes |
Streptococcus suis | 1544 | 478 | 764 | P1 7 (32235) | SSUIS | 6 | X | Firmicutes |
Sulcia muelleri | 193 | 51 | 37 | SMDSEM (59393) | SMUELL | 4 | - | Bacteroid. |
Sulfolobus islandicus | 2061 | 794 | 1152 | M 16 4 (58841) | SISLA | 7 | - | Crenarch. |
Vibrio cholerae | 3224 | 595 | 795 | M66 2 (59355) | VCHOL | 4 | X | Ī³ |
Xanthomonas campestris | 3381 | 764 | 1854 | ATCC 33913 (57887) | XCAMP | 4 | X plant | Ī³ |
Xylella fastidiosa | 1639 | 542 | 1070 | Temecula1 (57869) | XFAST | 4 | X plant | Ī³ |
Yersinia pestis | 2791 | 1425 | 2158 | Nepal516 (58609) | YPEST | 8 | X | Ī³ |
Yersinia pseudotuberculosis | 3406 | 687 | 1339 | IP 32953 (58157) | YPTUB | 4 | X | Ī³ |