Novel genomic resources for a climate change sensitive mammal: characterization of the American pika transcriptome

Table 2 Summary of the contigs present in each O. princeps dataset

	Total contigs	High coverage dataset¹	High elevation unique contigs²	Low elevation unique contigs²
No. of contigs	102,175	7,325	1,038	304
Mean coverage	5.5	33.2	7.4	8.0
Mean length	534.6	1,079.5	383.2	354.1
Mean no. of reads	16.6	137.0	11.4	12.9

¹ In the high coverage dataset each contig has a minimum length of 200 bases and a minimum of 5× coverage for each ecotype.
² Contigs composed of reads from a single elevation. Minimum length = 200 bases; minimum coverage = 5×.

ISSN: 1471-2164