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Table 2 Summary of the contigs present in each O. princeps dataset

From: Novel genomic resources for a climate change sensitive mammal: characterization of the American pika transcriptome

  Total contigs High coverage dataset1 High elevation unique contigs2 Low elevation unique contigs2
No. of contigs 102,175 7,325 1,038 304
Mean coverage 5.5 33.2 7.4 8.0
Mean length 534.6 1,079.5 383.2 354.1
Mean no. of reads 16.6 137.0 11.4 12.9
  1. 1 In the high coverage dataset each contig has a minimum length of 200 bases and a minimum of 5× coverage for each ecotype.
  2. 2 Contigs composed of reads from a single elevation. Minimum length = 200 bases; minimum coverage = 5×.