From: Haplotype analysis of sucrose synthase gene family in three Saccharumspecies
Saccharumspecies SNP | ScSuSy1 | ScSuSy2 | ScSuSy3 | ScSuSy4 | ScSuSy5 | total | bp/SNP |
---|---|---|---|---|---|---|---|
S. o. | 4/489 | 4/484 | 7/569 | 7/470 | 2/577 | 24/2589 | 108 |
S. r. | 7/489 | 3/484 | 7/569 | 9/470 | 6/577 | 32/2589 | 81 |
S. s. | 11/489 | 6/484 | 7/569 | 9/470 | 3/577 | 38/2589 | 72 |
Total SNPs count between the Saccharum species | |||||||
S. o. + S. r. | 10/489 | 5/484 | 8/569 | 12/470 | 7/577 | 42/2589 | 62 |
S. o. + S. s. | 14/489 | 9/484 | 10/569 | 15/470 | 5/577 | 53/2589 | 49 |
S. r + S. s. | 16/489 | 9/484 | 10/569 | 15/470 | 8/577 | 58/2589 | 45 |
S. s. + S. o. + S. r. | 20/489 | 10/484 | 11/569 | 18/470 | 9/577 | 51/2589 | 38 |
Identical SNPs count between the Saccharum species | |||||||
S. o. \ S. r. | 2/489 | 2/484 | 6/569 | 4/470 | 1/577 | 15/2589 | 172 |
S. o.\ S. s. | 1/489 | 1/484 | 4/569 | 1/470 | 0 | 7/2589 | 370 |
S. s. \ S. r. | 3/489 | 0 | 4/569 | 3/470 | 1/577 | 11/2589 | 238 |
S. s. \ S. o. \ S. r. | 1/489 | 0 | 4/569 | 1/470 | 0 | 6/2589 | 435 |