Skip to main content

Table 3 SNP counts per base pair in the five ScSuSy fragments within and between the three Saccharum species

From: Haplotype analysis of sucrose synthase gene family in three Saccharumspecies

Saccharumspecies SNP ScSuSy1 ScSuSy2 ScSuSy3 ScSuSy4 ScSuSy5 total bp/SNP
S. o. 4/489 4/484 7/569 7/470 2/577 24/2589 108
S. r. 7/489 3/484 7/569 9/470 6/577 32/2589 81
S. s. 11/489 6/484 7/569 9/470 3/577 38/2589 72
Total SNPs count between the Saccharum species
S. o. + S. r. 10/489 5/484 8/569 12/470 7/577 42/2589 62
S. o. + S. s. 14/489 9/484 10/569 15/470 5/577 53/2589 49
S. r + S. s. 16/489 9/484 10/569 15/470 8/577 58/2589 45
S. s. + S. o. + S. r. 20/489 10/484 11/569 18/470 9/577 51/2589 38
Identical SNPs count between the Saccharum species
S. o. \ S. r. 2/489 2/484 6/569 4/470 1/577 15/2589 172
S. o.\ S. s. 1/489 1/484 4/569 1/470 0 7/2589 370
S. s. \ S. r. 3/489 0 4/569 3/470 1/577 11/2589 238
S. s. \ S. o. \ S. r. 1/489 0 4/569 1/470 0 6/2589 435
  1. Note: S. o. : S. officinarum , S. r: S. robustum, S. s:S. spontaneum.
\