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Table 2 Major motifs in the predicted LRR domains of Populus LRR-RLKs

From: Genome-wide identification, characterization and expression analysis of populusleucine-rich repeat receptor-like protein kinase genes

LRR motifs

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

M1

G

x

I

P

x

x

L/i

G

x

L

x

x

L

x

x

L

D

L

S

x

N

x

L/f

s/t

M2

G

x

I

P

x

x

l/i

G

N

l

t

x

L

x

x

L

x

L

x

x

N

x

L/f

x

M3

G

x

x

p

x

x

l

x

x

l

x

x

L

x

x

L

x

L

s

x

N

x

F/l

s/t

M5

G

x

I/l

P

x

x

l

g

x

L

x

x

L

x

x

L

D

L

S

x

N

x

L

t

M6

G

x

I

P

x

x

L/i

x

x

C

x

x

L

x

x

L

x

L

x

x

N

x

L/f

s

M7

G

p

I/l/v

P

x

x

l

x

x

l

x

x

L

x

x

L

D

L

S

x

N

x

L/f

s

M8

G

x

I

P

x

e

l/i

G

x

L

x

x

L

x

x

L

x

L

x

x

N

x

L

x

M9

G

x

I/l

P

x

x

l/f/i

g

n

L

s

n

L

x

x

L

d

L

S

x

N

x

L/f

x

M10

G

x

I/l

P

x

x

l/f/i

g

N

L

x

n

L

x

x

L

x

L

s

x

N

x

L/f

s

M11

G

x

i

p

x

s

l

g

x

l

x

n

L

x

x

L

x

L

s

x

N

x

L/f

s

M12

G

x

x

p

x

x

l/f/i

x

x

l

x

n

L

x

y

L

d

L

S

x

N

x

l/F

x

M15

G

x

i

P

x

x

l

x

x

l

x

x

L

x

x

L

d

L

s

x

N

x

L/f

s

M16

G

x

I/l

P

x

x

l/i

g

x

L

x

x

L

x

x

L

x

L

s

x

N

x

L/f

x

M18

G

s

i/l/f

P

x

x

L/i

g

N

L

x

x

L

x

x

L

x

L

x

x

N

x

L/f

x

M19

G

x

I/l

P

x

s/e/a

l/f

x

x

l

x

x

L

x

x

L

d

L

S

x

N

x

L/f

s

M20

G

x

i/l

P

x

x

l/i

x

x

l

x

n

L

x

x

L

x

L

x

x

N

x

l/F

s

M23

G

x

I/l

P

x

e

L/i

G

n

L

x

x

L

x

x

L

x

l

x

x

N

x

L/f

s/t

  1. If the bits value of the amino acid at this position is smaller than 0.5, it is represented with x; 1>bits ≥ 0.5, with lowercase; 2> Bits ≥ 1, with capital letter; 3> bits ≥ 2, with bold capital; bits≥3, with underlined capital letter in bold.
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BMC Genomics

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