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Table 5 Occurrence of “TTCCA” repeats and its derivatives with single or multiple base alterations per 3564 array of DYZ1 in DU145 and LNCaP with the reference sequence AC068123.5

From: Fate of the human Y chromosome linked genes and loci in prostate cancer cell lines DU145 and LNCaP

Serial No.

Repeat unit and derivatives

Number of TTCCA repeat units and its derivatives per 3564 bp HaeIII unit of DYZ1array

AC068123.5

DU145

LNCaP

1

Actual Size (bp)

3564

3564

3465

2

TTCCA

229

235

228

3

1 bp derivatives

292

289

282

4

ATCCA

11

9

9

5

TACCA

3

3

2

6

TTACA

14

13

15

7

TTCAA

21

22

22

8

TTTCA

19

19

19

9

TTCTA

25

25

25

10

TTCCT

32

33

33

11

GTCCA

27

31

28

12

TGCCA

9

10

10

13

TTGCA

25

22

22

14

TTCGA

60

60

57

15

TTCCG

18

17

16

16

CTCCA

14

14

14

17

TCCCA

6

4

4

18

TTCCC

8

7

6

19

2 bp derivatives

142

142

139

20

3 bp derivatives

37

33

30

21

4 bp derivatives

9

9

10

22

5 bp derivatives

1

1

1