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Table 1 Summary statistics of the A) S. cerevisiaeand B) E. coli gene regulatory network (GRN), protein-protein network (PPN) and transcription regulatory network (TRN)

From: Interfacing cellular networks of S. cerevisiae and E. coli: Connecting dynamic and genetic information

A) S. cerevisiae

 

Nodes

Edges

GCC

Edge density

Assortativity

GRN

9,163

27,493

8,978

6.5497e-04

0.0154

PPI

6,169

112,562

6,156

5.9165e-03

-0.5968

TRN

4,441

12,873

4,441

1.3057e-03

-0.1314

B) E. coli

GRN

7,258

21,820

7,064

8.2853e-04

0.0220

PPI

3,619

20,198

3,360

3.0852e-03

-0.1190

TRN

1,681

3,717

1,585

2.6324e-03

-0.3176

  1. GCC means the giant connected component.
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BMC Genomics

ISSN: 1471-2164

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