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Table 5 List of embryonic stem cell related genes in Ant-alus and Sens-alus

From: A gene expression restriction network mediated by sense and antisense Alu sequences located on protein-coding messenger RNAs

Gene symbol

RefSeq accession

Gene name

Ant-alus

  

ANGEL2

NM_144567.3

Protein angel homolog 2

CBX5

NM_012117.2; NM_001127321.1; NM_001127322.1

Chromobox protein homolog 5

CD24

NM_013230.2

Signal transducer CD24

CDC6

NM_001254.3

Cell division control protein 6 homolog

CDH1

NM_004360.3

cadherin 1, type 1, E-cadherin (epithelial)

CECR1

NM_017424.2; NM_177405.1

Cat eye syndrome critical region protein 1

DHFR

NM_000791.3

dihydrofolate reductase

DPPA4

NM_018189.3

Developmental pluripotency-associated protein 4

FAM108B1

NM_001025780.1

Abhydrolase domain-containing protein FAM108B1

GNPTAB

NM_024312.3

N-acetylglucosamine-1-phosphotransferase subunit beta

MICB

NM_005931.3

MHC class I polypeptide-related sequence B

NANOG

NM_024865.2

Homeobox protein NANOG

NUDT15

NM_018283.1

Probable 7,8-dihydro-8-oxoguanine triphosphatase NUDT15

PDK1

NM_002610.3

3-phosphoinositide-dependent protein kinase 1

PFAS

NM_012393.

Phosphoribosylformylglycinamidine synthase

PHF17

NM_024900.3

Protein Jade-1

RPS24

NM_001142285.1

ribosomal protein S24

RRM2

NM_001034.3; NM_001165931.1

Ribonucleoside-diphosphate reductase subunit M2

RRP15

NM_016052.3;

RRP15-like protein

SFRS1

NM_006924.4; NM_001078166.1

Splicing factor, arginine/serine-rich 1

TDGF1

NM_003212.2

Teratocarcinoma-derived growth factor 1

TERF1

NM_003218.3; NM_017489.2

Telomeric repeat-binding factor 1

Sens-alus

  

ATP1A2

NM_000702.3

Sodium/potassium-transporting ATPase subunit alpha-2

CDT1

NM_030928.3

DNA replication factor Cdt1

DSG2

NM_001943.3

Desmoglein-2

LIN28

NM_024674.4

Lin-28 homolog A

MCM4

NM_005914.2; NM_182746.1

DNA replication licensing factor MCM4

NCAPH

NM_015341.3

Condensin complex subunit 2

NFYB

NM_006166.3

Nuclear transcription factor Y subunit beta

PAICS

NM_006452.3; NM_001079524.1; NM_001079525.1

Phosphoribosylaminoimidazole carboxylase

PIPOX

NM_016518.2

Peroxisomal sarcosine oxidase

PPM1B

NM_177968.2

Protein phosphatase 1B

PRDM14

NM_024504.2

PR domain zinc finger protein 14

PRKX

NM_005044.3

Serine/threonine-protein kinase PRKX