Physiological stressors and invasive plant infections alter the small RNA transcriptome of the rice blast fungus, Magnaporthe oryzae

Table 2 Cluster analysis of all small RNA libraries compared between two conditions

Libraries compared	Total clusters^a	No. of genes associated	RTNs^b	TNs^c	Inverted repeats	Tandem repeats	Other repeats	Intergenic regions
Mycelial libraries
CM vs CS	4	2	0	0	0	0	0	2
CM vs MM	37	12	1	0	0	0	0	24
CS vs MM	31	6	0	0	2	0	0	23
NS vs CM	154	52	4	1	3	2	0	96
CM vs PQ	251	179	2	0	1	3	1	69
Infected Rice leaf libraries
LMg0 vs 72	281	247	0	0	0	1	3	38
LMg0 vs 96	232	192	2	0	0	2	3	39
LMg72 vs 96	188	164	0	0	0	2	2	29

ISSN: 1471-2164