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Table 1 Summary of assembly and annotation results for P. poissonii and P. wilsonii using Trinity

From: Comparative transcriptome analysis and marker development of two closely related Primrose species (Primula poissonii and Primula wilsonii)

  P. poissonii P. wilsonii
Total number of reads 55,056,996 × 2 55,468,564 × 2
Total number of contigs 55,284 55,011
Mean length of contigs 655 722
Median length of contigs 432 469
N50 value of contigs 938 1085
Length range of contigs 200 ~ 16,932 200 ~ 12,384
GC content 41.3% 41.2%
Contigs with BLASTX hit 36,239 (65.6%) 35,857 (65.1%)
Contigs with annotation 28,435 (51.4%) 28,302 (51.4%)