Table 2 Gene Ontology terms significantly over-represented in the test dataset versus the reference set

Biological Process

GO:0007059

chromosome segregation

0.05

3

3

GO:0016790

thiolester hydrolase activity

0.03

6

11

GO:0035966

response to topologically incorrect protein

0.03

3

2

GO:0006281

DNA repair

0.04

14

43

GO:0006289

nucleotide-excision repair

0.01

4

2

GO:0032012

regulation of ARF protein signal transduction

0.05

3

3

GO:0006544

glycine metabolic process

0.05

3

3

GO:0042542

response to hydrogen peroxide

0.04

5

8

GO:0022613

ribonucleoprotein complex biogenesis

0.03

11

28

GO:0071843

cellular component biogenesis at cellular level

0.03

14

41

GO:0006979

response to oxidative stress

0.04

15

47

GO:0006974

response to DNA damage stimulus

0.02

16

47

GO:0044085

cellular component biogenesis

0.05

27

102

Molecular Function

GO:0008173

RNA methyltransferase activity

0.05

5

9

GO:0004221

ubiquitin thiolesterase activity

0.03

4

5

GO:0003960

NADPH: quinone reductase activity

0.03

3

2

GO:0016790

thiolester hydrolase activity

0.03

6

11

GO:0035091

phosphatidylinositol binding

0.05

5

9

Cellular Component

GO:0015934

large ribosomal subunit

0.03

5

9

GO:0005802

trans-Golgi network

0.04

3

2