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Table 1 General features of the G. lozoyensis genome

From: Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea lozoyensis

Features

 

Assembly size (Mb)

39.6

Scaffold N50 (kb)

2453

Coverage (fold)

80

G + C content (%)

45.8

GC exonic (%)

49.06

GC intronic (%)

41.98

Repeat rate (%)

0.5

Protein-coding genes

13103

Gene density (per Mb)

330.38

Exons per gene

2.98

tRNAs

131

rRNAs

22

NRPSs

6

PKSs

24

PKS-NRPS hybrids

5

DMATSs

2

Terpene synthases

14

NRPS-like

13

PKS-like

1

Chalcone or stilbene synthase gene

1

Secondary metabolite gene clusters

49

  1. Mb mega bases, PKS polyketide synthase, NRPS nonribosomal peptide synthetase, PKS-NRPS hybrid polyketide synthase-nonribosomal peptide synthetase hybrid, DMATS dimethylallyl tryptophan synthase, tRNAs transfer RNA, rRNA ribosomal RNA.