Table 3 Summary of GO enriched clusters in groups of genes sorted by expression level in blastocysts
Cluster # | Expression level | ||||
|---|---|---|---|---|---|
High | Medium high | Medium | Medium low | Low | |
1 | Ribosome | Lumen | Lumen | Lumen | DNA repair/Stress response |
2 | Oxidative Phosphorylation | Cytoskeleton | Chromosome structure | Zinc finger PHD | Zinc/ion binding |
3 | Ubiquitination | Protein catabolism | Protein complexes | Transcriptional regulation | Protein catabolism |
4 | Spliceosome | Chromosome structure | Mitochondrial subunits | Mitochondrial matrix | Protein transport |
5 | RNA binding | Nucleic acid binding | Nucleic acid binding/Phospho-rylation | Ankyrin repeats | tRNA aminoacylation |
6 | Electron transport | Ubiquitination | Endoplasmic reticulum | Protein/nucleotide interactions | Zinc finger CH2 |
7 | Protein localization | Protein complex synthesis | Cell cycle | Microtubules | Cell death |
8 | Protein biosynthesis | Cell cycle | Cellular membranes | Mitochondrial membranes | DNA repair/Polymerase |
9 | Ribosomal subunits | Mitochondrial components | Ankyrin repeats | Phosphorylation | Suppression of differentiation |
10 | Protein folding | RNA splicing | tRNA | Zinc finger CH2 | Nucleic acid binding |