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Table 5 GO molecular functions representative of top five overrepresented functional annotation clusters among genes overexpressed in embryos versus somatic cells at P < 0.001 and 10 FC

From: RNA-seq analysis of single bovine blastocysts

Molecular process

Gene count

P value

Genes

Transcription factor activity

33

0.002

HNF1B, CDX2, SOX2, DMRTA2, TCF7L1, CITED1, MSX2, GATA2, POU5F1, LHX2, HOXC5, SPIC, LHX8, PITX1, KLF5, NANOG, GSC, TBX3, RCOR2, ESRRB, OTX2, ESRRG, TEAD3, FOXR1, MYCN, HOXB4, GCM1, HNF4A, LASS3, FOXG1, DLX4, HEYL, HOXB9

ATPase activity, coupled

14

0.003

RECQL4, ATP1B3, ATP1B2, DDX4, DDX28, DDX3Y, ABCC4, ATP6V1G3, ABCC2, ATP6V0A4, KATNAL2, ABCC5, ATP7B, MYH10

Transmembrane receptor protein tyrosine kinase activity

7

0.002

IGSF10, TYRO3, FGFR4, FGFR3, PTK7, PDGFRA, KIT

Folic acid binding

3

0.028

FOLR1, SLC19A3, GNMT

Helicase activity

8

0.037

RECQL4, DDX28, PIF1, TDRD9, DDX3Y, MCM4, RAD54L, DDX4