From: Autotoxicity mechanism of Oryza sativa: transcriptome response in rice roots exposed to ferulic acid
Gene name | RAB-DB Locus ID | TIGR Locus ID | Short exposures | Long exposures | Description |
---|---|---|---|---|---|
 |  |  | Fold change a | Fold change a |  |
Crown root-related genes | |||||
OsCRL1 | Os03g0149000 | LOC_Os03g05500 | −1.09 | 1.15 | Protein of unknown function DUF260 domain containing protein. |
OsCRL4 | Os03g0666100 | LOC_Os03g46330 | −1.21 | −1.04 | SEC7-like domain containing protein. |
OsCRL5 | Os07g0124700 | LOC_Os07g03250 | 1.64 | 1.06 | ANT (Ovule development protein aintegumenta). |
OsARL1 | Os03g0149100 | LOC_Os03g05510 | Â | Â | Â |
WOX11 | Os07g0684900 | LOC_Os07g48560 | 1.86 | −1.39 | Homeobox domain containing protein. |
Lateral root-related genes | |||||
ARF-16 | Os06g0196700 | LOC_Os06g09660 | −1.73* | −1.43* | Auxin response factor 1. |
AUX/IAA-1 | Os01g0178500 | LOC_Os01g08320 | 1.88* | −1.20 | AUX/IAA protein family protein. |
AUX/IAA-11 | Os03g0633500 | LOC_Os03g43400 | 1.07 | −1.40 | Auxin-responsive protein IAA17 (Indoleacetic acid-induced protein 17) (Auxin response 3). |
AUX/IAA-13 | Os03g0742900 | LOC_Os03g53150 | 1.22 | −1.04 | AUX/IAA protein family protein. |
AUX/IAA-23 | Os06g0597000 | LOC_Os06g39590 | 1.77* | −1.07 | Auxin-responsive protein IAA14 (Indoleacetic acid-induced protein 14) (SOLITARY-ROOT protein). |
AUX/IAA-29 | Os12g0601400 | LOC_Os12g40900 | 1.16* | −1.28 | Auxin-responsive protein (Aux/IAA) (Fragment). |
OsCel9C | Os05g0212300 | LOC_Os05g12150 | −1.59* | 1.43* | Endo-beta-1,4-glucanase precursor (EC 3.2.1.4). |
Root hair-related genes | |||||
OsEXPA30 | Os10g0535900 | LOC_Os10g39110 | Â | Â | Â |
OsRHL1 | Os06g0184000 | LOC_Os06g08500 | Â | Â | Â |
OsCSLD1 | Os10g0578200 | LOC_Os10g42750 | 1.47 | −1.94* | Cellulose synthase-9. |
OsEXPA17 | Os06g0108600 | LOC_Os06g01920 | Â | Â | Â |
OsEXPB5 | Os04g0552200 | LOC_Os04g46650 | 1.22 | 1.11 | Beta-expansin 5. |
OsAPY1 | Os07g0682800 | LOC_Os07g48430 | 1.35 | −1.05 | Apyrase. |