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Table 6 Ferulic acid-responsive transcripts related to phytohormones

From: Autotoxicity mechanism of Oryza sativa: transcriptome response in rice roots exposed to ferulic acid

  Short exposures Long exposures
Functional categories In genome On arrary Detected Increased a Decreased Increased Decreased
Ethylene Total 29 27 22 3 0 0 0
  Biosynthesis 13 11 10 3 0 0 0
  Signaling 16 16 12 0 0 0 0
JA Total 38 34 34 7* 0 0 0
  Biosynthesis 27 24 16 1 0 0 0
  Signaling 11 10 10 6 0 0 0
  1. a Functional categories of genes, total number of genes found within the rice genome, numbers of genes present on and detected on arrays, and numbers of genes showing significant differences (FDR <0.1) in transcript abundance are shown in rows and columns labeled accordingly.
  2. Phytohormone families that are overrepresented in the response group are shown with asterisks.