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Table 2 Summary of alternative splice events detected by RNA-Seq

From: The developing xylem transcriptome and genome-wide analysis of alternative splicing in Populus trichocarpa(black cottonwood) populations

  Alternative splice (AS) type1, 2  
  A3SS A5SS IR ES Total
Number AS events detected 8963 5545 11175 2219 27902
% of AS events 32.1 19.9 40.0 8.0 100
Number in 1 individual 4560 2873 4194 1224 12851
Number in ≥ 15 individuals 572 310 651 59 1592
Number in 20 individuals 195 80 134 15 424
% in 1 individual only 50.1 51.2 37.5 55 46
% in ≥15 individuals 6.4 5.6 5.8 2.7 5.7
% in 20 individuals 2.2 1.4 1.2 0.7 1.5
  1. 1A3SS, alternative 3′ splice site; A5SS, alternative 5′ splice site; IR, intron retention; ES, exon skip.
  2. 2Data are for all AS events detected.