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Table 5 HapMap CEU datasets

From: Sensitive and specific detection of mosaic chromosomal abnormalities using the Parent-of-Origin-based Detection (POD) method

  1M 660W Omni1 CytoSNP12
Accession GSE16894 GSE17208 GSE17197 GSE17123
# Trios 27 27 27 27
Markers 1128030 634750 1014080 277297
CNV-specific 29367 62095 88450 467
Date Processed 5/19/2008 2/10/2009 6/29/2009 7/1/2009
Abnormalities:     
AMP 77 63 84 18
DEL 225 248 277 8
HD 401 3877 4231 17
UPhD 0 0 0 0
UPiD 9 13 10 6
Unk 159 50 108 20
Total 871 4251 4710 69
  1. 1M: Human1M-Duov3; 660W: Human660W-Quadv1; Omni1: HumanOmni1-Quadv1; CytoSNP12: HumanCytoSNP-12v2-1; Accession: accession identifier in the NCBI GEO database; Markers: approximate number of autosomal markers following conversion; CNV-specific: the number of autosomal CNV-specific probes; Date Processed: the processing date reported in the Illumina final report. AMP amplification, DEL hemizygous deletion, HD homozygous deletion, UPhD uniparental heterodisomy, UPiD uniparental isodisomy, Unk detected abnormalities of undetermined type.