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Table 5 Overview of IR spectral parameters

From: ATR-FTIR spectroscopy reveals genomic loci regulating the tissue response in high fat diet fed BXD recombinant inbred mouse strains

  

Band area limits

 

Traits

Epididymal adipose tissue

Liver tissue

Muscle tissue

AFAT

A3006+A2957+A2922+A2853+A1743+A1464+A1160

A2963+A2927+A2854+A1745+A1455

A2961+A2927+A2854+A1741+A1457

 

A3006 : A [2997:3017] cm-1

-

-

 

A2957 : A [2950:2966] cm-1

A2963 : A [2952:2968] cm-1

A2961 : A [2951:2968] cm-1

 

A2922 : A [ 2905:2936] cm-1

A2927 : A [2900:2938] cm-1

A2927 : A [2900:2939] cm-1

 

A2853 : A [2840:2861] cm-1

A2854 : A [2840:2861] cm-1

A2854 : A [2840:2861] cm-1

 

A1743 : A [1730:1760] cm-1

A1745 : A [1737:1759] cm-1

A1741 : A [1735:1755] cm-1

 

A1464 : A [1454:1474] cm-1

A1455: A [1437:1475] cm-1

A1457 : A [1450:1472] cm-1

 

A1160 : A [1133:1200] cm-1

-

-

ASATF

A2922+A2853

A2927+A2854

A2927+A2854

 

A2922 : A [2905:2936] cm-1

A2927 : A [2900:2938] cm-1

A2927 : A [2900:2939] cm-1

 

A2853 : A [2840:2861] cm-1

A2854 : A [2840:2861] cm-1

A2854 : A [ 2840:2861] cm-1

AUNSATF

A3006 : A [2997:3017] cm-1

_

_

ACOL

A1340+A1320+A1280

A1340

A1340+A1282

 

A1340 : A [1336:1345] cm-1

A1340: A [1332:1346] cm-1

A1340 : A [1334:1355] cm-1

 

A1320 : A [1315:1327] cm-1

-

-

 

A1280 : A [1275:1285] cm-1

-

A1282 : A [1275:1287] cm-1

APROT

A1550+A1340+A1320+A1280

A1547+A1340

A1550+A1340+A1282

 

A1550 : A [1506:1571] cm-1

A1547 : A [1500:1565] cm-1

A1550 : A [1500:1570] cm-1

 

A1340 : A [1336:1345] cm-1

A1340 : A [1332:1346] cm-1

A1340 : A [1334:1355] cm-1

 

A1320 : A [1315:1327] cm-1

-

-

 

A1280 : A [1275:1285] cm-1

-

A1282 : A [1275:1287] cm-1

AGLYC

-

A1154+A1081+A1044

A1081+A1046

 

-

A1154 : A [1141:1174] cm-1

-

 

-

A1081 : A [1071:1091] cm-1

A1081 : A [1067:1100] cm-1

 

-

A1044 : A [1020:1050] cm-1

A1046: A [1030:1052] cm-1

  

Band Area Ratio

 

saturated to unsaturated fat ratio

(A2922+A2853)/A3006

_

_

acyl chain length

A2922/A2957

A2927/A2963

A2927/A2961

collagen integrity

A1550/(A1340+A1320+A1280)

A1547/A1340

A1550/(A1340+A1282)

lipid to protein ratio

(A3006+A2957+A2922+A2853+A1743+A1464+A1160)/ (A1550+A1340+A1320+A1280)

A2963+A2927+A2854+A1745+A1455/ A1547+A1340

A2961+A2927+A2854+A1741+A1457/ A1550+A1340+A1282

  1. AFAT, total fat; ASATF, saturated fat ; AUNSATF, unsaturated fat; ACOL, collagen; APROT, total protein; AGLYC, glycogen. “A” is the area obtained by “method B” integration bands in OPUS. The min-max normalized data were used for area calculation.
  2. These parameters were used for the quantitative evaluation of compositional differences in reproductive adipose tissue, liver and muscle of BXD RI strains.