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Table 3 Microarray expression ratios of Li 1 /WT and corroboration by RT-qPCR analysis*

From: Transcript profiling by microarray and marker analysis of the short cotton (Gossypium hirsutum L.) fiber mutant Ligon lintless-1 (Li 1 )

   3DPA 12DPA 16DPA
   Micro-array RT-qPCR Micro-array RT-qPCR Micro-array RT-qPCR
GhiAffx.58712.1.S1_at cellulose synthase catalytic subunit 0.93 0.84 0.39 0.34 0.51 0.49
Ghi.3562.1.A1_at cellulose synthase-like protein e6-like 0.49 0.70 1.17 1.32 2.24 1.94
Ghi.5057.1.S1_s_at protein wax2 0.47 0.41 0.59 0.46 0.42 0.29
Ghi.6485.1.S1_s_at pathogenesis-related protein 10 1.34 1.51 70.42 127.01 77.04 191.91
Gra.3004.2.S1_s_at expansin a10 0.82 0.82 0.46 0.38 0.46 0.33
Ghi.6465.2.S1_at expansin-like b1 0.99 0.40 6.32 6.74 10.12 0.37
Gra.2056.1.A1_s_at beta-galactosidase 13 0.23 0.12 0.09 0.05 0.17 0.11
Ghi.1314.1.S1_x_at Tubulin alpha 4 (Tua 4) 0.91 0.57 0.88 0.49 1.02 0.80
  1. *Bold and underlined indicates significant at the Bonferroni-corrected 0.05 probability level for microarray data and at the 0.05 probability as determined by a two-tailed t-test for qPCR data.