Skip to main content

Table 3 Gene expression measured by RT-qPCR in salmon lice from two strains differing in EMB susceptibility

From: Salmon lice (Lepeophtheirus salmonis) showing varying emamectin benzoate susceptibilities differ in neuronal acetylcholine receptor and GABA-gated chloride channel mRNA expression

Accession no.

Annotation

Experiment 1

Experiment 2

Microarray

RT-qPCR

Pearson correlation

Microarray

RT-qPCR

Pearson correlation

p-value

Fold change (PT/S)

p-value

Fold change (PT/S)

r

p-value

p-value

Fold change (PT/S)

p-value

Fold change (PT/S)

r

p-value

ADD24187.1

Neuronal acetylcholine receptor subunit Ī±3

7.59E-05

-3.21

0.000

-3.08

0.93

<0.0001

4.29E-03

-2.52

0.009

-2.64

0.89

0.0001

EFN73916.1

GABA receptor subunit alpha

NS

-1.19

0.015

-1.35

N/A

N/A

2.05E-04

-1.75

0.005

-1.56

0.89

0.0001

XP_003494528.1

Cytochrome p450 18a1

3.42E-08

3.34

0.000

3.14

0.95

<0.0001

N/A

NS

1.00

N/A

N/A

AAS13464.1

Cytochrome p450 15a1

8.93E-04

2.14

0.000

1.82

0.95

<0.0001

N/A

NS

1.09

N/A

N/A

NP_001136104.1

Carboxylesterase

1.13E-04

1.38

0.041

1.21

0.65

0.02

NS

1.12

NS

1.12

N/A

N/A

XP_797271.2

Maltase-glucoamylase

9.12E-05

-104.50

0.000

-194.85

0.99

<0.0001

7.10E-03

1.72

0.017

2.00

Ā Ā 
  1. Abbreviations: NS Not significantly different (p<0.05), N/A Not applicable.
  2. For selected genes, mRNA expression was measured in salmon lice from two strains differing in EMB susceptibility (see FigureĀ 1 for information on strains), results compared to findings obtained in microarray analyses. Significance (p < 0.05) assessed by t-test (Welch) for microarray analysis and one-way ANOVA for RT-qPCR analysis. Fold changes ā‰„ 1.3 are underlined.