Figure 3
From: De novotranscriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity
Classification of contigs mapping in putative novel loci. Classification of contigs mapping in putative novel loci, based on the coding potential calculated by CPC and on comparison with NCBI nr plant proteins and Rfam databases. Potentially coding contigs were classified as full ORFs begin with a start codon and end with an in-frame stop codon, or as partial ORFs if one of these two features was missing. The following two categories include contigs with a negative coding potential but Blast hit against the NCBI NR protein database or contigs with similarity with sequences in the Rfam RNA database.