Table 1 List of annotated mitochondrial genes and regions of Ascaridia galli , Ascaridia columbae and Ascaridia sp
Gene/region | Position/length (bp) | Start/stop codon | Anticodons | ||||
|---|---|---|---|---|---|---|---|
A. galli | A. columbae | Ascaridiasp. | A. galli | A.columbae | Ascaridiasp. | ||
cox1 | 1-1563 (1563) | 1-1563 (1563) | 1-1581 (1581) | ATG/TAA | ATG/TAA | GTG/TAG | Â |
tRNA-Cys (C) | 1565-1620 (56) | 1565-1620 (56) | 1562-1616 (55) | Â | Â | Â | GAT |
Non-coding region (NCL) | 1621-2230 (610) | 1623-2183 (563) | 1617-2182 (566) | Â | Â | Â | Â |
tRNA-Asn (N) | 2231 -2284 (54) | 2184-2241 (58) | 2183-2239 (57) | Â | Â | Â | GTT |
tRNA-Tyr (Y) | 2286-2344 (59) | 2246-2303 (58) | 2240-2295 (56) | Â | Â | Â | GTA |
nad1 | 2342-3217 (876) | 2301-3176 (876) | 2298-3167 (870) | TTG/TAA | TTG/TAA | GTT/TAG | Â |
atp6 | 3217-3813 (597) | 3176-3772 (597) | 3170-3766 (597) | ATA/TAA | ATA/TAA | TTG/TAG | Â |
tRNA-Lys (K) | 3816-3876 (61) | 3790-3853 (64) | 3772-3833 (62) | Â | Â | Â | TTT |
tRNA-Leu UUR (L2) | 3876-3931(56) | 3853-3907 (55) | 3831-3886 (56) | Â | Â | Â | TAA |
tRNA-Ser AGN (S1) | 3932-3982 (51) | 3908-3962 (55) | 3887-3939 (53) | Â | Â | Â | GCT |
nad2 | 3986-4828 (843) | 3966-4808 (843) | 3943-4779 (837) | TTG/TAA | TTG/TAA | TTG/TAG | Â |
tRNA-Ile (I) | 4832-4891 (60) | 4823-4884 (62) | 4781-4841 (61) | Â | Â | Â | GAT |
tRNA-Arg (R) | 4896-4950 (55) | 4888-4944 (57) | 4845-4900 (56) | Â | Â | Â | ACG |
tRNA-Gln (Q) | 4951-5005 (55) | 4945-4998 (54) | 4901-4954 (54) | Â | Â | Â | TTG |
tRNA-Asp (D) | 5005-5063 (59) | 5011-5070 (60) | 4971-5025 (55) | Â | Â | Â | GTC |
tRNA-Glu (E) | 5065-5125 (61) | 5069-5126 (58) | 5025-5083 (59) | Â | Â | Â | TTC |
rrnS | 5123-5823 (701) | 5124-5826 (703) | 5084-5774 (691) | Â | Â | Â | Â |
tRNA-Ser UCN (S2) | 5826-5880 (55) | 5837-5891 (55) | 5781-5835 (55) | Â | Â | Â | TGA |
tRNA-Phe (F) | 5883-5939 (57) | 5898-5953 (56) | 5841-5897 (57) | Â | Â | Â | GAA |
cytb | 5964-7067 (1104) | 5975-7075 (1101) | 5919-7019 (1101) | ATG/TAA | GTT/TAA | GTT/TAG | Â |
tRNA-Leu CUN (L1) | 7067-7122 (56) | 7077-7134 (58) | 7020-7075 (56) | Â | Â | Â | TAG |
cox3 | 7144-7914 (771) | 7154-7918 (765) | 7097-7864 (768) | TTG/TAG | TTG/TAA | TTG/TAA | Â |
tRNA-Thr (T) | 7889-7944 (56) | 7899-7956 (58) | 7845-7900 (56) | Â | Â | Â | TAG |
nad4 | 7939-9174 (1236) | 7951-9186 (1236) | 7901-9130 (1230) | GTG/TAG | ATA/TAG | TTG/TAG | Â |
Non-coding region(NCR) | 9175-9331 (157) | 9187-9277 (91) | 9131-9231 (101) | Â | Â | Â | Â |
tRNA-Met (M) | 9345-9407 (63) | 9288-9352 (65) | 9232-9294 (63) | Â | Â | Â | CAT |
tRNA-Gly (G) | 9407-9462 (56) | 9355-9410 (56) | 9296-9351 (56) | Â | Â | Â | TCC |
cox2 | 9463-10158 (696) | 9411-10106 (696) | 9364-10050 (687) | TTG/TAG | TTG/TAG | ATG/TAG | Â |
tRNA-His (H) | 10163-10218 (56) | 10113-10167 (55) | 10049-10105 (57) | Â | Â | Â | GTG |
rrnL | 10211-11166 (956) | 10167-11121 (955) | 10103-11055 (953) | Â | Â | Â | Â |
nad3 | 11167-11502 (336) | 11119-11454 (336) | 11053-11391 (339) | TTG/TAA | ATA/TAA | TTG/TAA | Â |
nad5 | 11502-13082 (1581) | 11451-13031 (1581) | 11394-12968 (1575) | ATA/TAA | ATA/TAG | ATT/TAG | Â |
tRNA-Ala (A) | 13085-13139 (55) | 13031-13085 (55) | 12968-13022 (55) | Â | Â | Â | TGC |
tRNA-Pro (P) | 13140-13197 (58) | 13094-13149 (56) | 13026-13082 (57) | Â | Â | Â | TGG |
tRNA-Val (V) | 13197-13252 (56) | 13149-13205 (57) | 13082-13137 (56) | Â | Â | Â | TAC |
nad6 | 13253-13687 (435) | 13206-13640 (435) | 13138-13572 (435) | TTT/TAA | TTG/TAA | TTG/TAG | Â |
nad4L | 13702-13941 (240) | 13656-13895 (240) | 13588-13827 (240) | ATT/TAA | GTT/TAA | ATT/TAA | Â |
tRNA-Trp (W) | 13919-13976 (58) | 13873-13930 (58) | 13805-13862 (58) | Â | Â | Â | TCA |