Table 2 Summary for the outcomes of de novo transcriptome assembly using three datasets in C. sinensis
From: Global transcriptome profiles of Camellia sinensis during cold acclimation
Dataset 1 | Dataset 2 | Dataset 3 | |
|---|---|---|---|
Number of transcripts (≥100 bp) | 226,026 | 177,439 | 295,551 |
Number of transcripts (remove redundancy) | 216,831 | 170,650 | 282,395 |
Total base pairs (Mbp) | 77.36 | 50.36 | 94.71 |
Average length (bp) | 356 | 295 | 335 |
N50 (bp) | 529 | 403 | 480 |
Mapping ratio (%) | 76.94 | 64.87 | 76.91 |