Table 6 Summary for DGE datasets
From: Global transcriptome profiles of Camellia sinensis during cold acclimation
Summary | CA1 | CA3 | CK |
|---|---|---|---|
Raw tags | 3,689,000 | 3,615,500 | 3,675,000 |
Clean tags (total) | 3,599,673 | 3,528,122 | 3,586,229 |
Aligned tags | 2,027,613 | 2,402,599 | 1,810,760 |
Aligned tags (%) | 56.33% | 68.10% | 50.49% |
Clean Tags (unique) | 882,038 | 456,976 | 932,551 |
Aligned unique-tags | 117,591 | 104,604 | 111,505 |
Aligned unique-tags (%) | 13.33% | 22.89% | 11.96% |
Transcripts with aligned tags | 52,590 | 46,331 | 51,333 |
Transcripts with aligned tags (%) | 24.25% | 21.37% | 23.67% |
Transcripts with uniquely aligned tags | 33,380 | 28,462 | 32,519 |
Transcripts with uniquely aligned tags (%) | 15.39% | 13.13% | 15.00% |