Table 1 Non-conservative amino acid exchanges (Dayhoff matrix index < 5) in selected proteins* of clone CHA strains
From: Intraclonal genome diversity of Pseudomonas aeruginosa clones CHA and TB
Locus_tag | Name | Encoded product | aa exchange |
|---|---|---|---|
PA0247 | PobA | p-hydroxybenzoate hydroxylase | T98M |
PA0595 | OstA | organic solvent tolerance protein precursor involved in outer membrane biogenesis | M907T |
PA0831 | OruR | transcriptional regulator of ornithine utilization | W197C |
PA1148 | ToxA | exotoxin A precursor | F22S |
PA1712 | ExsB | exoenzyme S synthesis protein B | R52G |
PA1717 | PscD | type III secretion export protein | V346E |
PA1718 | PscE | type III secretion export protein | C40G |
PA2236 | PslF | glycosyl transferase, Psl exopolysaccharide biosynthesis | Y247D |
PA3061 | PelD | membrane-bound c-di-GMP-specific receptorregulating Pel exopolysaccharide production | Y208H |
PA3063 | PelB | Pel exopolysaccharide biosynthesis | W791L |
PA3344 | RecQ | ATP dependent DNA helicase | R571C |
PA3805 | PilF | pilus biogenesis, outer membrane pilotin for localization and multimerization of secretin PilQ | L243P |
PA3810 | HscA | molecular chaperone | R285G |
PA3910 | EddA | extracellular DNA degradation protein | P368L |
PA3946 | RocS1 | sensor of two-component system controlling cupC fimbrial and efflux pump gene expression | I399S |
PA4085 | CupB2 | periplasmic chaperone | H242L |
PA4086 | CupB1 | major pilus subunit | Q102T; V154E |
PA4776 | PmrA | two component regulatory system modulating resistance to cationic antimicrobial peptides | L71R |
PA4777 | PmrB | two component regulatory system modulating resistance to cationic antimicrobial peptides | Y345H |
PA5483 | AlgB | two component response regulator controlling alginate biosynthesis | L382R |
PA5484 | KinB | two component sensor kinase (negative regulation of alginate production, positive regulation of virulence-associated phenotypes) | Y50H |
PA5493 | PolA | DNA polymerase I | C882R |