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Table 4 Strain-specific losses of PAO1 DNA

From: Intraclonal genome diversity of Pseudomonas aeruginosa clones CHA and TB

Locus_tag

Description

PA0977-0987 (RGP7)

region only partially conserved in all strains; ORFs PA0980-0981 absent in strain CHA only, ORFs PA0986-0987 absent in 491 only

PA0927-0928 (ldhA, gacS)

start of ldhA (278 nt) and end of gacS (146 nt) missing in strain CHA

PA1907

partial deletion (183 nt) in strain 491

PA2136

partial deletion (first 30 nt) in strain 491

PA2177

partial deletion (356 nt) in strain PT22