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Table 3 Categorization of E. histolytica strains

From: Genomic distribution of SINEs in Entamoeba histolytica strains: implication for genotyping

Locus

13

17

19

Genotype

Strain

type

type

type

 

PVBM08B

H

R

H

HRH

MS96 -3382

R

R

H

RRH

MS84-1373

H

N

H

HNH

MS27-5030

H

N

H

HNH

HK-9

N

R

R

NRR

PVBM08F

H

R

H

HRH

200:NIH

H

R

R

HRR

25591

H

R

N

HRN

26825

N

H

N

NHN

27749

H

N

R

HNR

28577

H

H

H

HHH

30325

H

H

H

HHH

32083

N

N

R

NNR

32223

H

R

H

HRH

32257

H

H

H

HHH

33526

H

H

H

HHH

34153

H

R

R

HRR

34180

H

H

H

HHH

34276

H

R

R

HRR

581

N

N

H

NNH

654

N

N

H

NNH

812

H

N

R

HNR

878

N

R

R

NRR

  1. Axenic strains (PVBM08B - 200:NIH; boldfaced) and xenic cultures (25591–878) of E. histolytica were categorized into HM-1:IMSS (H)/Rahman (R)/neither (N) type based on amplification patterns at loci 13, 17, and 19. Abbreviation used for axenic strains PVBM08B, MS96-3382, MS84-1373, MS27-5030, PVBM08F, 200:NIH in the figures as PVB, MS96, MS84, MS27, PVF and NIH respectively.
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BMC Genomics

ISSN: 1471-2164

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