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Table 1 Details of virus isolates analysed in this study

From: Next generation sequencing of viral RNA genomes

Virus

Original reference

Host species

Origin

Year of isolation

GenBank no.

Lyssavirus RABV

     

RV2324

ISR-50

Dog

Israel

1950

KF154998

RV50

AZBAT 7453

Bat (Eptesicus fuscus)

US, Az

1975

JQ685956*

RV61

-

Human (canine strain)

UK (ex-India)

1987

KF154996

RV437

269

Raccoon Dog

Estonia

-

KF154997

RV2417

R16/08

Dog

UK (ex Sri Lanka)

2008

KF154999

RV2627

CASA 09/08

Cow (Canine strain)

Morocco

2009

KF155001

RV2772

Rab91/ D10-867

Dog

Tanzania

2010

KF155002

RV2516

23

Cow (Canine strain)

Iraq

2010

KF155000

Lyssavirus EBLV-1

     

RV20

RA552

Bat (Eptesicus serotinus)

Denmark

1986

KF155003

Lyssavirus EBLV-2

     

RV1787

603-04

Bat (Myotis Daubentonii)

UK (Staines)

2004

KF155004

Lyssavirus IKOV

     

RV2508

snp0971#

African Civet

Tanzania

2011

JX193798

  1. * Published after sequence was obtained prior to this publication.
  2. Sequence confirmed by Sanger sequencing from the bat brain material.
  3. #Both brain and TCSN were sequenced. For analysis see Table 2.
  4. - Data not available.