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Table 1 Putative carotenoid hydroxylase genes identified in 18 algae genomes

From: Evolutionary origins, molecular cloning and expression of carotenoid hydroxylases in eukaryotic photosynthetic algae

Gene locations (Locations are indicated by positions on either chromosomes or scaffolds) Protein length Types
Chlorophyta---- Chlamydomonas reinhardtii
jgi|Chlre4|309780|kg.chromosome_8_#_293_#_ABQ59243.1 577 CYP97C
jgi|Chlre4|196742|DNE_DNE_gwH.55.10.1 652 CYP97A
jgi|Chlre4|196744|DNE_DNE_e_gwW.42.59.1 655 CYP97A
jgi|Chlre4|283001|au.g1522_t1 502 CYP97B
jgi|Chlre4|164400|fgenesh2_kg.C_scaffold_40000013 298 BCH
Chlorophyta---- Volvox carteri
jgi|Volca1|83281|estExt_Genewise1Plus. C_520019 576 CYP97C
jgi|Volca1|100143|fgenesh4_pg.C_scaffold_106000021 672 CYP97A
jgi|Volca1|65884|e_gw1.51.4.1 642 CYP97B
jgi|Volca1|44641|gw1.75.40.1 294 BCH
Chlorophyta---- Chlorella NC64A
jgi|ChlNC64A_1|51247|fgenesh3_pg. C_scaffold_6000061 578 CYP97C
jgi|ChlNC64A_1|138471|IGS.gm_20_00220 615 CYP97B
jgi|ChlNC64A_1|24463|e_gw1.13.95.1 238 BCH
Chlorophyta---- Chlorella vulgaris
jgi|Chlvu1|60845|GG.C169_S07_00141 541 CYP97C
jgi|Chlvu1|24726|e_gw1.1.89.1 535 CYP97A
jgi|Chlvu1|26454|e_gw1.3.111.1 534 CYP97B
jgi|Chlvu1|44442|estExt_Genewise1Plus.C_160017 347 BCH
Chlorophyta---- Coccomyxa sp c-169
jgi|Coc_C169_1|63212|Genemark1.3995_g 541 CYP97C
jgi|Coc_C169_1|52277|estExt_fgenesh1_pm.C_10317 432 CYP97A
jgi|Coc_C169_1|12656|e_gw1.3.115.1 534 CYP97B
jgi|Coc_C169_1|30875|estExt_Genewise1Plus.C_160317 347 BCH
Chlorophyta---- Ostreococcus lucimarinus
jgi|Ost9901_3|33533|eugene.0900010237 545 CYP97C
jgi|Ost9901_3|47300|estExt_GenewiseEukaryote.C_Chr_130084 495 CYP97A
jgi|Ost9901_3|1824|gwEuk.21.62.1 461 CYP97A
jgi|Ost9901_3|29177|eugene.0100010571 564 CYP97B
jgi|Ost9901_3|18007|fgenesh1_pg.C_Chr_14000053 561 CYP97B
jgi|Ost9901_3|9013|gwEuk.10.453.1 153 BCH
Chlorophyta---- Osetrococcus tauri
jgi|Ostta4|1830|gw1.09.00.100.1 490 CYP97C
jgi|Ostta4|23029|estExt_fgenesh1_pm.C_Chr_13.00010043 484 CYP97A
jgi|Ostta4|27418|estExt_gwp_GeneWisePlus.C_Chr_01.00010469 577 CYP97B
jgi|Ostta4|23060|estExt_fgenesh1_pm.C_Chr_15.00010014 485 CYP97B
jgi|Ostta4|18835|e_gw1.08.00.85.1 407 OTHER
jgi|Ostta4|5089|gw1.10.00.289.1 216 BCH
Chlorophyta---- Osetrococcus RCC809
jgi|OstRCC809_1|1644|gw1.3.120.1 490 CYP97C
jgi|OstRCC809_1|38666|fgenesh1_pg.C_scaffold_13000165 542 CYP97A
jgi|OstRCC809_1|53931|estExt_Genewise1.C_21287 525 CYP97B
jgi|OstRCC809_1|87721|eugene1.0000120100 576 CYP97B
jgi|OstRCC809_1|16226|gw1.3.1299.1 153 BCH
Chlorophyta---- Micromonas pusilla   
jgi|MicpuC2|32152 550 CYP97C
jgi|MicpuC2|26780 580 CYP97A
jgi|MicpuC2|22138 530 CYP97B
jgi|MicpuC2|57732 526 OTHER
jgi|MicpuC2|11104 230 BCH
Chlorophyta---- Micromonas sp. RCC299
jgi|MicpuN2|95887|estExt_Genewise2Plus.C_Chr_140254 542 CYP97C
jgi|MicpuN2|83128|e_gw2.06.152.1 525 CYP97A
jgi|MicpuN2|96121|estExt_Genewise2Plus.C_Chr_160324 539 CYP97B
jgi|MicpuN2|88940|e_gw2.16.55.1 574 CYP97B
jgi|MicpuN2|76186|gw2.07.573.1 232 BCH
Rhodophyta---- Cyanidioschyzon merolae
gnl|CMER|CMV041C [pt] beta-carotene hydroxylase 259 CRTR
Bacillariophyta---- Thalassiosira pseudonana
jgi|Thaps3|36235|e_gw1.9.19.1 667 CYP97B
jgi|Thaps3|264039|thaps1_ua_kg.chr_13000087 547 CYP97B
Bacillariophyta---- Phaeodactylum tricornutum
jgi|Phatr2|26422|estExt_Genewise1.C_chr_50056 770 CYP97B
jgi|Phatr2|16586|e_gw1.27.30.1 539 CYP97B
Bacillariophyta---- Fragilariopsis cylindrus
jgi|Fracy1|169705|estExt_Genewise1.C_61231 528 CYP97B
jgi|Fracy1|170430|estExt_Genewise1.C_71165 614 CYP97B
Haptophyceae---- Emiliania huxleyi
jgi|Emihu1|463287|estExtDG_fgeneshEH_pg.C_230139 618 CYP97B
Cryptophyta---- Guillardia theta
jgi|Guith1|114743|au.78_g15845 582 CYP97B
jgi|Guith1|88554|estExt_Genewise1Plus.C_630014 492 CYP97B
jgi|Guith1|158065|fgenesh2_pm.48_#_5 499 CYP97B
Cercozoa---- Bigelowiella natans CCMP2755
jgi|Bigna1|39488|e_gw1.33.13.1 474 CYP97C
jgi|Bigna1|52980|estExt_Genewise1Plus.C_140020 545 CYP97B
Stramenopiles---- Aureococcus anophagefferens
jgi|Auran1|19592 528 CYP97B
jgi|Auran1|34662 432 CYP97B
  1. OTHER indicates two genes belonged to no one subfamily of CYP97.